Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_030940.1 Length=32637 Score E Sequences producing significant alignments: (Bits) Value seq253 185 2e-42 >seq253 Length=360942 Score = 185 bits (204), Expect = 2e-42 Identities = 274/384 (71%), Gaps = 16/384 (4%) Strand=Plus/Minus Query 556 AGGCGCTAGGCTGACTGGTACGGGCAACCTAGGTGAACTGCTGATAAACACCGTAAGGAT 615 |||||||||||| |||||||| ||| | ||||||||||||||||| ||| | || Sbjct 151094 AGGCGCTAGGCTTGATGGTACGGTTAACACAAGTGAACTGCTGATAAACGTCGTCAACAT 151035 Query 616 TGACGAGCCAAAGCTGCTGACAGGCTCGAACCAAAAGGTAC-GTGGTCGGTTATCTCCGT 674 | | |||||||| | |||| ||||| | |||||||| || || | || ||| | | Sbjct 151034 TAAGCAGCCAAAGGTACTGAAAGGCTGTAGCCAAAAGGCACAGTAGCTGGATATTCCTTT 150975 Query 675 AGGTCGTGGAGATACGTCGCCTTCAGA-CCACCGGTGAAAAGGCAGGTCCTAACCCAGTC 733 | ||| |||||| | | || | | ||||| | | | |||| ||||||||| | Sbjct 150974 TTATACTGGGGATACGCGGACAACAAAGCTACCGGCGGAGAAGCAGAACCTAACCCA-TT 150916 Query 734 GTGTGACAGTCAGGGAACGTGGTAAGCCCGTATCGCCGCCC--TCGGGGCAGGGGAGCCG 791 |||| | ||||| |||||| |||||||||||||| | |||| ||||| || Sbjct 150915 GTGTTCTTCGAACGGAACATGGTAAATCCGTATCGCCGCCCGGTTGGGG-AGGGGCCTCG 150857 Query 792 TAAGGCGAACTGTTGGCGGTGCGGGTATGGGATCGCAGAGAAAGCGAACGCCAGGCTGTA 851 ||||| ||||||||||||||||| || ||| | ||||||||||| |||| ||||| Sbjct 150856 TAAGGGAAACTGTTGGCGGTGCGGATAGAGGAGGACTGAGAAAGCGAAGGCCATTCTGTA 150797 Query 852 ATCGTCTGGATAGGGGTT----------GGAACATCACCCCACGGGAAACCGGGCAGACT 901 || | ||||||| |||| | ||||| ||| |||| |||| |||||| ||| Sbjct 150796 ATGGAATGGATAGAGGTTGCGTCGATAGGCAACATTACCTCACGCGAAAGCGGGCAAACT 150737 Query 902 TCTGCGTGGTCTTTCGTCGCAAGA 925 || | ||||||||| || | ||| Sbjct 150736 TCAGTCTGGTCTTTCATCACGAGA 150713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104314678000694