Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_031007.1 Length=223935 Score E Sequences producing significant alignments: (Bits) Value seq229 176 6e-39 >seq229 Length=456533 Score = 176 bits (194), Expect = 6e-39 Identities = 384/567 (68%), Gaps = 6/567 (1%) Strand=Plus/Minus Query 88180 AAGCAACTCATCTTCTCCACAGGGGAAGCCGGATGCGGTAAGACCTTCATGGCCACCGCC 88239 || ||| | || ||| | | ||||||||||| |||||||| || || || ||||| Sbjct 314279 AAACAATTAATTTTCGCAAATGGGGAAGCCGGTTGCGGTAAAACGTTTATTAGTACCGCA 314220 Query 88240 TACGCGGTAGAGCGATTACTGGCCAAAGACGTCGATCGTATCATTGTCACTCGCCCTGTC 88299 || | || |||| | |||||| || || ||||||||||| || |||||| Sbjct 314219 CTTGCTGCGGATGCATTAATCAATAAAGACATCAATAAAATCATTGTCACACGACCTGTC 314160 Query 88300 CTCTCCGCAGATGAAGACTTAGGCTTCCTGCCGGGCGATGTTGGTGAAAAGTTCGCGCCT 88359 | ||||| ||||| | || || || ||||||||| | | ||||||||| ||||| Sbjct 314159 TTGCAGGCAGAAGAAGATCTCGGTTTTCTTCCGGGCGATATGGCTGAAAAGTTTGCGCCA 314100 Query 88360 TACTTCCGACCTGTTTACGATGTGCTCTTAAAACGTCTGGGCAGCCGTTTCTTACAATAC 88419 || || || || ||||| || || | | ||| | | || | || ||||||||| Sbjct 314099 TATTTTCGGCCGGTTTATGACGTATTAGTGAAAAGATTAGGTAATTCCTTTTTACAATAC 314040 Query 88420 TGCCTGAAACCGGGTATAGACAAGGTTGAGATAGCTCCCTTCGCCTATATGCGTGGCCGC 88479 || || || | || | |||||||| || || || || |||||||||||||| || Sbjct 314039 TGTTTGCGGCCTGAGATTGCTAAGGTTGAAATTGCACCATTTGCCTATATGCGTGGTCGT 313980 Query 88480 AACTTCGAGAACGCGGTCGTTATCTTAGATGAAGCTCAGAACACCACTGCTCA-GCAGAT 88538 | || || || ||| | || || ||||||||||| || || |||| ||| || || Sbjct 313979 ACATTTGAAAATGCGATTGTGATATTAGATGAAGCGCAAAATGTGACTG-TCACACAAAT 313921 Query 88539 GAAGCTCTTCCTGACCCGTATCGGGGAGAACTGT-ATCGTTATCGTTAACGGTGACGTCA 88597 ||| | ||| | || ||| | || ||||| ||| | || || ||||| ||||| || | Sbjct 313920 GAAAATGTTCTTAACGCGTTTAGGAGAGAA-TGTCACAGTGATTGTTAATGGTGATGTAA 313862 Query 88598 CTCAGTGCGACTTACCTTCCGGGGTGAAGTCGGGACTGGCCGACGCATTAGCCCG-TTTC 88656 | ||||| || |||| || || | || ||| | ||||| || ||| || ||| Sbjct 313861 CGCAGTGTGATCTACCAGAAGGTGTTACATCTGGATTAGCCGATGCCTTACAGCGTTTTA 313802 Query 88657 GAAGAAGACGAATTAGTCGGCATCGTTCGTTTTACGAAAGATGACTGTGTGCGCTCTCCG 88716 | || || ||| | |||| || | ||| || ||||||||||||||||| | Sbjct 313801 GCAG-TGATGAAATGGTCGCGATGATCAATTTCACCGTTGATGACTGTGTGCGCTCAACA 313743 Query 88717 CTTTGTCAGCGTGCGTTATTTGCGTAT 88743 | || || || || ||||| || ||| Sbjct 313742 TTGTGCCACCGCGCTTTATTAGCTTAT 313716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716448658714600