Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_031032.1 Length=24320 Score E Sequences producing significant alignments: (Bits) Value seq1089 109 9e-20 >seq1089 Length=16580 Score = 109 bits (120), Expect = 9e-20 Identities = 194/273 (71%), Gaps = 15/273 (5%) Strand=Plus/Plus Query 14600 CAGATCAAACCAGAATATCAAAAGAAACTAGAAGATTTCTTTAAATTATATGGTTATAAA 14659 || ||||||||||||||||| || || || |||||||| | |||||||| ||| Sbjct 4072 CAAATCAAACCAGAATATCAGAACGTTTTACAAAATTTCTTTTCCATGTATGGTTACAAA 4131 Query 14660 AAGAATGAAGTAAAAGTGCCAAATCTTCACACTAGACAAAGTTGGAATTATGTTCAAACA 14719 ||| ||||||||| ||||| | ||||||||||||| |||||| ||||| |||||| Sbjct 4132 TCAAATCTAGTAAAAGTTCCAAACTTACACACTAGACAAAATTGGAACTATGTGCAAACA 4191 Query 14720 -AAAGATGTTAATATTATCGGT--AAT----TTTAACACAGAAGATTTAAACGAACTGAA 14772 || |||| || |||| ||| ||| || | | | | |||| ||| || ||| Sbjct 4192 GAAGGATG-CAACATTACAGGTTCAATGGCGGTTGATA-ATATGATTGAAA--TAC-GAA 4246 Query 14773 AGCTATCTTTGATGGGGGTATCACATTGTGGCACACAAATGATGTAGGAAATTATAGTTT 14832 | |||||| || | || || ||||| ||||| ||| ||||| | || |||||| || Sbjct 4247 A--CATCTTTAATAGCGGAATAACATTATGGCATACAGATGATATTGGTAATTATGCCTT 4304 Query 14833 AAGTAATGAGGTGATATAGATATGTTTAATAAT 14865 |||| ||| |||||| |||| || ||| Sbjct 4305 GTCGAATGGAGTGTTATAGA-ATGTCAAAAAAT 4336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 77704060919177