Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1348 684 0.0 seq869 293 3e-74 seq1394 100 4e-16 >seq1348 Length=1847788 Score = 684 bits (758), Expect = 0.0 Identities = 1525/2265 (67%), Gaps = 34/2265 (2%) Strand=Plus/Plus Query 75368 TTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCA 75427 ||||| | || || ||||| | | || ||||||||||| | | ||| ||||| || Sbjct 1698159 TTATCTACGGTAAATTGAATAGCATTGGCGGCTGGTTTTGTTCTCAAATAATACATGCCG 1698218 Query 75428 GTTTTTAGACCCAGACT-CCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGG 75486 || |||| | || || | ||| | |||||||| ||| || | |||| ||| | || Sbjct 1698219 GTCTTTA-AGCCTGATTTCCAGGCATAGAAATGTATGGAGGTCAATTTGCCGTAATTTGG 1698277 Query 75487 ATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGC 75546 ||||| | ||| ||||| | ||| ||||||||||| |||||||| || | || || || Sbjct 1698278 CTCGGCCACATGTATATTGAACGATTGACTTTGATCTATGAAAGCGCCACGGTCGGCAGC 1698337 Query 75547 CATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATC 75606 ||||| ||| ||||||| | ||| ||||||| |||||| | | | |||| Sbjct 1698338 CATTTGTATGGTGGTCTTAACGGAAATCTCCCAAACTGTTTTGTATAGATCACGTATATG 1698397 Query 75607 ATCTGGAAGAT-TTGTATT--TTGAATGGATCCGCCATCAGATATAATTGTATTCTTGAT 75663 | || | | || ||| ||| ||||| |||| || || |||||| |||| || || Sbjct 1698398 TTTGGGTATTTCTTCTATGGCTTGTATGGAGCCGCGATTGGAAATAATTTTATTTTTCAT 1698457 Query 75664 CTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTG 75723 ||||||| ||| || | ||||||||| || |||| | |||| |||| |||| | Sbjct 1698458 TTCATCATCCCATAAATCAAGTTCGGTTAAATCTTTAAGCAAATGATGATTGACAACATT 1698517 Query 75724 AAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTC 75783 |||||||| ||||| || | || ||||||||||||| ||| || ||||| | ||||| Sbjct 1698518 GAATTCTCCCGACAAAACACGTCTAGTGTAAATATTAGAGGTGTACGGTTCAAAGGATTC 1698577 Query 75784 ATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATT 75843 |||||| || | |||||| || || ||||| || ||||| || || | | ||| ||| Sbjct 1698578 ATTGTTGCCTAGAATTTGTGCGGTCGAAGCTGTGGGCATTGGGGCTAATAGCAAAGAATT 1698637 Query 75844 TCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGG 75903 | | ||||||| |||||||| || || | | | ||| | ||| | |||| || Sbjct 1698638 GCGTACACCATGTTGACTGATTTTCTCCTTCAACTCTGACCAGTTCCACAAGTCTGTGGG 1698697 Query 75904 TACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGT 75963 | || ||| | ||| |||||||| || || || || | | || ||| || Sbjct 1698698 TGTTTTATTCCACATATCATATTGTAGTATACCCTTACTTACTGGACAGCCGGGATAAGT 1698757 Query 75964 TTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAAT 76023 ||| || || || || ||||| || | ||| ||||| || || || || || |||||||| Sbjct 1698758 TTCATATGTGCCATCTTTTTCGGCCAATTCACAACTAGCTTCCAAAGCGCCATAATAAAT 1698817 Query 76024 TGTTTCGAAAATCTTCTTATT--AAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGT 76081 ||||||||||||| | ||| | | ||| ||| ||| ||| | || ||| | Sbjct 1698818 AGTTTCGAAAATCTGTTGATTTAACAAAAATGC-CTT-TTCACTCTCATAGGGGTAACGC 1698875 Query 76082 AAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTA 76141 | | ||| || | ||| || | |||||||| || ||||||||||| | ||| | | | Sbjct 1698876 ATTAAAATCAAAGTATCGGCAAAACCCTGAACACCTATACCAATAGGACGATGACGCAAA 1698935 Query 76142 TTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTT 76201 ||||| || |||||| || | || ||| | || || || || ||||| |||||||| Sbjct 1698936 TTGGACTTTCTAGCTTCGGGCAACGGATAAAAGTTGATGTCGATGATTTTGTTGAGATTC 1698995 Query 76202 CTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAA----TTTTCCATCTAT 76257 || || ||||| || | || | ||| |||||||| ||||| | | Sbjct 1698996 TTGGTAATAACTTTTGTAACATTTTTCAATTTTTTGAAATCAAAGGTCTTTTCTGGC-GT 1699054 Query 76258 CACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGC 76317 |||||||||||||| || || || || | ||||||||| |||| ||||| || | Sbjct 1699055 GACAAACATATTAAGGGCAATGGAGGCCAAATTACAAACAGCTATCTCATCAGGGGCAGA 1699114 Query 76318 ATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTT 76377 ||||| || ||||| ||||||| || || ||||| || || |||| ||||| ||||| Sbjct 1699115 ATATTCTACAATCTCTGTGCATAAGTTGCTGCACTTAATGGTGCCAATGTTTTGCTGGTT 1699174 Query 76378 GCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGA 76437 ||| || ||| || | || || || | | | | || || || ||||||| || | Sbjct 1699175 GCTTTTGCGGTTGCAAGCATCTTTGTACAACATATAGGGTGTACCGGTTTCAACTTGAGC 1699234 Query 76438 TTCGATAATAGATTTCCAGACGACTCT-AGCTTTTATTAT-AGATTTGTATCGCTTCTCT 76495 ||| || |||| ||| | || || |||||| | | |||| | | | | ||| Sbjct 1699235 TTCAATTATAGCAAACCA-AAGAGCCTGAGCTTTGACGGTGCGATTGGCTTTTCCT-TCT 1699292 Query 76496 CTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGA 76555 ||||||| | ||||| || ||| || || || ||||||||||| | || ||| ||| Sbjct 1699293 TTTTCATACTTGGTATACAATTCTTCGAACTCCTCACCCCAAACATCCTGCAGACCGGGA 1699352 Query 76556 CATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGA 76615 |||| | |||||||| | ||||| ||||||| ||| | || ||||||||||| | Sbjct 1699353 CATTTGTGTGGACACATTAGGGACCAGTCACCATTTTCTTCCACACGTTTCATAAACAAG 1699412 Query 76616 TCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTC 76675 || |||||||| |||||| || ||||||| || |||| | ||||| || || ||||| Sbjct 1699413 TCGGGTATCCACAGAGCATAGAAAAGATCTCTGGCTCTATGCTCTTCCTTGCCGGTATTT 1699472 Query 76676 TTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATA 76735 || || | ||| | || || | |||||| |||||||| || || | ||| || || | Sbjct 1699473 TTCTTTAAATCCAAAAATTCAAAAATATCTGAATGCCAAGGCTCCAAATAAATAGCAAAG 1699532 Query 76736 ACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTC 76795 |||| || ||||| ||| |||||||| | ||| | ||| || ||| | || || Sbjct 1699533 GCACCAGGGCGTTTGCCACCACCCTGATCAACATAGCGGGCTACATTGTTAAACACCCTG 1699592 Query 76796 AACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCA 76855 | |||||| | | || || || || || ||||| || ||| || | || || Sbjct 1699593 AGCATTGGTACCAGACCATTTGAGGTGCCGTTTGTGCCGTCAATGGAAGTGCCCTTGGCC 1699652 Query 76856 CGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGT 76915 | || | || ||| || || || ||| ||| || || | ||||| || Sbjct 1699653 CTTATGCAGTGTACGTTTATGCCAATACCACCCGCCGATTTGGATATCATGGCACATTGT 1699712 Query 76916 TTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCAT-GTTAAGAAGAAAACAGCT 76974 | || || | | || ||||| ||| ||| ||| ||| || || ||| ||||| Sbjct 1699713 TCCACTGACTTGAAAATACCCTCAATAGAATCGGCCACCATGGTCAATAAG-AAACACGA 1699771 Query 76975 AGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCA 77034 |||| || | | || | || ||||||||||| || ||||| || || | Sbjct 1699772 CGACAACTGCGGTCTATTGGTAGCAGCCGCGAACAATGTAGGCGACGCATGGGTAAAATA 1699831 Query 77035 TTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCC 77094 ||||| | | ||| || ||||||||| | | || ||||| | ||| || || Sbjct 1699832 ACGCTCAGACAACAAATTATAAGTTTCAATAGCCGAATCAATATCGTCTCCATGTATACC 1699891 Query 77095 TACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAA 77154 || ||| || | ||| ||||||||||| |||| || ||| ||||| ||| ||||| | Sbjct 1699892 TATAGCTACTCTCATTAACATATGCTGTGGTCTCTCAACAATCTTACCATTCATTTTTAG 1699951 Query 77155 CAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTA 77214 ||| || ||| | |||| ||||| || || || |||||||| |||||| | || || Sbjct 1699952 CAAATAAGATCTCTCCAGTGTTTTGAAGCCGAAGTAGTTGTAGCCAAAGTCACGATCATA 1700011 Query 77215 AATAATAACCGAATT--TAGTTTGTCCTTATATTTGGTAACAATATCCATGACAGTGGTA 77272 |||||| |||||| | || | | | | | || || || ||| | ||||| Sbjct 1700012 AATAATTGACGAATTCAAACGTTCTGCATTTTTCTG----CACTA--CATTGTAATGGTA 1700065 Query 77273 ----GAAATAATTGGAGATCGTATTCCATTTTTAGGATTAACATAGTTAAATAAGTCTTC 77328 ||||| | ||| ||| || || | | ||||||| | | | | | || Sbjct 1700066 TTCGGAAATCAATGGCGATGGTCGCCCCGTCTCTTTATTAACAAAATGATACAGATCACT 1700125 Query 77329 CATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGC 77388 || || || |||| |||||| ||||| ||||| | ||| || || || || | ||| Sbjct 1700126 TATAACCTCTGAGAATACTTTTTTCGTTTCTTTGTGCAAATTGGAGACAGCAATGCGAGC 1700185 Query 77389 AGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAA 77448 || | || ||||| || ||| | |||||| | || ||||| | |||||||| || Sbjct 1700186 TGCCAATATGGCATAATCTCCATGATTTGTAGTTAATGTAGCTGCGGTCTCTGCCGCCAA 1700245 Query 77449 AGTATCTAATTCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGGCTAT 77508 | | || | |||| |||||||| || || || || | ||| || |||| | || Sbjct 1700246 ATTGTCCAGTTCTTGTGTAGTAACACCACAGTAAAGGCCATTAATTACCTTCAGTGTAAT 1700305 Query 77509 TTTGATAGGATCTACAAACTCGGTGTTCAAACCATAACATAATTTTCTAATACGAGATGT 77568 | ||||| ||||| || ||||||| |||||||||| ||| || || ||||| Sbjct 1700306 GGCCACTGGATCAACAAAATCCATGTTCAAGCCATAACATAGCTTTTGTATGCGTGATGT 1700365 Query 77569 GATTTTATCAAACATG-ACATTCTCCTTACATCCATTTCGTTTAA 77612 |||||||| || ||| || | ||||| | ||||| |||||||| Sbjct 1700366 TATTTTATCGAA-ATGTACCTCTTCCTTGCGTCCATCTCGTTTAA 1700409 >seq869 Length=1271022 Score = 293 bits (324), Expect = 3e-74 Identities = 497/709 (70%), Gaps = 17/709 (2%) Strand=Plus/Minus Query 46464 ATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTTTGAC 46523 ||| || || ||||||||||| ||| | || ||||||||| ||||| | ||||| Sbjct 484139 ATCGGCCACAAATTCTATATATTCCGACATTAATTTACAATTCATGCCTATCAAATTGAC 484080 Query 46524 CGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCG--ATATTATCGAT 46581 || | ||| || ||||| || || |||||||| | || || || | ||| | || || Sbjct 484079 GGGCAAAGCATCTGTAAGGAATTCCTGTTCAATTTTCACCGCTTCAGTGATAATTTCAAT 484020 Query 46582 GTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAA-ACATGCAAAATC 46640 | || | || ||| || | || | |||||||||||||||||| ||| |||||||| Sbjct 484019 AATTCTCTCTCG--ACTGGGACGTTGTACCAAATGTTTAAACATTAATACA-GCAAAATC 483963 Query 46641 ACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAG 46700 |||||| | || ||||| | || || || || || ||||| || |||||||| || Sbjct 483962 ACAATGTAAACCCTCATCACGTGATATCAACTCATTGGAGAATGTAAGACCAGGCATAAG 483903 Query 46701 TCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTAC 46760 ||||| || || |||||||| || | || ||| ||| |||||| || || ||||| Sbjct 483902 ACCACGTTTCTTTAGCCAAAAGATGGAAGCAAAACTGCCACTAAAGAAAATACCCTCTAC 483843 Query 46761 AGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGAA----TCCA--CCT 46814 ||| || || || | || | || || || | || | ||| ||| |||| || Sbjct 483842 AGCAGCAAAAGCAATAATACGTTCACCAAAATTTGC-TGATTTCGAAGAAATCCAAGCCA 483784 Query 46815 TTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 46874 ||| ||||||| ||||| ||| ||| ||||| ||||| ||||||||||||||| | Sbjct 483783 TTG--CCCAATCGGCCTTACGCTTAACAGCTGGCATAGTTTCAATAGCATTAAAGAGATA 483726 Query 46875 GtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATG 46934 | | |||| ||| |||| ||| |||| |||| || |||||||||||| || || Sbjct 483725 ATCACGCTGTTCACGATCCTTAATATAACTATCAATTAGAATACTATACATTTCAGAGTG 483666 Query 46935 AATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTC 46994 | ||||| || || || ||||| || || ||||| | ||| || |||| ||||| || Sbjct 483665 TACATTTTCCATGGCAATTTGAAAGCCATAGAAACAGCGTGCCTCTGTAACTTGTACTTC 483606 Query 46995 TGTACAAAATCGTTCAGACAA-ATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATG 47053 | | | || ||||| ||||| ||| ||||| || || ||||| ||| || || || | Sbjct 483605 TTGAGAGAAACGTTC-GACAAGATTTTCATTGACAATGCCATCGGAAGCGGCGAAGAAAG 483547 Query 47054 CCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATAT 47113 | | |||||| ||| |||| |||| | || ||| | | |||||| | ||| Sbjct 483546 CAAGAACATGTGAAATGAAATGACGCTCATTGTCGGTGAGTCTTTCCCAGTCGGAGTTAT 483487 Query 47114 CTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTT 47162 |||| || | |||||||||||| | ||||| || || || || || || Sbjct 483486 CTTTAGAAAGATCTACTTCTTCTACCGTCCAAAAAGAAGCTTCGGCCTT 483438 >seq1394 Length=309634 Score = 100 bits (110), Expect = 4e-16 Identities = 87/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 41821 AATTCCCAATTCCTTAACCTGTGACAGAGATCTCCAATCCATATTAGCACTTCCTAAATA 41880 ||| || ||||| |||||||| | | ||||||||| |||||||| ||||| || ||||| Sbjct 287882 AATACCTAATTCTTTAACCTGCGTTAAAGATCTCCAGTCCATATTGGCACTGCCCAAATA 287941 Query 41881 AATATGCATATTATCAGATATCCAAAATTTTGTGTGAAGAACTCCACC 41928 |||||| | || ||||| ||||| |||||||| || | ||| ||||| Sbjct 287942 AATATGTTTTTTGTCAGAAATCCAGAATTTTGTATGTAAAACACCACC 287989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712919134292160