Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_031043.1 Length=229501 Score E Sequences producing significant alignments: (Bits) Value seq229 170 3e-37 >seq229 Length=456533 Score = 170 bits (188), Expect = 3e-37 Identities = 335/490 (68%), Gaps = 4/490 (1%) Strand=Plus/Minus Query 88150 AAACAACTGATATTCGCCACCGGTGAAGCAGGGTGCGGTAAAACATTCCTTTGCGCCGCC 88209 |||||| | || ||||| | || ||||| || ||||||||||| || || | |||| Sbjct 314279 AAACAATTAATTTTCGCAAATGGGGAAGCCGGTTGCGGTAAAACGTTTATTAGTACCGCA 314220 Query 88210 TACGCTGCCGAACGTCTACTGGCAAAAGACTTTGACCGTATCATTGTCACCCGTCCAGTC 88269 ||||| || || | |||||| | | ||||||||||| || || ||| Sbjct 314219 CTTGCTGCGGATGCATTAATCAATAAAGACATCAATAAAATCATTGTCACACGACCTGTC 314160 Query 88270 CTCTCTGCAGATGAAGACCTTGGCTTCTTGCCCGGCGACGTCTCAGAGAAGTTCGCCCCT 88329 | ||||| ||||| || || || | || ||||| | | || ||||| || || Sbjct 314159 TTGCAGGCAGAAGAAGATCTCGGTTTTCTTCCGGGCGATATGGCTGAAAAGTTTGCGCCA 314100 Query 88330 TACTTCCGTCCTGTCTACGACGTGCTAAGCAAACGCTTAGGTGGTCAATTCTTACGCTAC 88389 || || || || || || ||||| || ||| | |||||| | || |||| ||| Sbjct 314099 TATTTTCGGCCGGTTTATGACGTATTAGTGAAAAGATTAGGTAATTCCTTTTTACAATAC 314040 Query 88390 TGTTTAAAGCCGGGAATTGACAAGGTAGAGATTGCTCCCTTCGCCTACATGCGCGGACGT 88449 ||||| ||| | |||| ||||| || ||||| || || ||||| ||||| || ||| Sbjct 314039 TGTTTGCGGCCTGAGATTGCTAAGGTTGAAATTGCACCATTTGCCTATATGCGTGGTCGT 313980 Query 88450 AGCTTTGAAAATGCAGTCATTTTATTAGATGAAGCTCAGAACACTACTGCTCA-GCAGAT 88508 | ||||||||||| | | ||||||||||||| || || |||| ||| || || Sbjct 313979 ACATTTGAAAATGCGATTGTGATATTAGATGAAGCGCAAAATGTGACTG-TCACACAAAT 313921 Query 88509 GAAGCTCTTCCTGACACGTATCGGGGAGAACTGTCTC-GTGATTGTCAATGGCGATATTA 88567 ||| | ||| | || ||| | || ||||| |||| | |||||||| ||||| ||| | | Sbjct 313920 GAAAATGTTCTTAACGCGTTTAGGAGAGAA-TGTCACAGTGATTGTTAATGGTGATGTAA 313862 Query 88568 CTCAGTGCGACTTACCGAAAGGGGTACGTTCTGGGCTGGCCGATGCGCTAACGCGTTTTG 88627 | ||||| || |||| |||| || ||||| | |||||||| || ||||||| Sbjct 313861 CGCAGTGTGATCTACCAGAAGGTGTTACATCTGGATTAGCCGATGCCTTACAGCGTTTTA 313802 Query 88628 ACACTGACGA 88637 || ||| || Sbjct 313801 GCAGTGATGA 313792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 734259477332280