Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_031047.1 Length=170770 Score E Sequences producing significant alignments: (Bits) Value seq1596 107 2e-18 seq613 82.4 8e-11 >seq1596 Length=248270 Score = 107 bits (118), Expect = 2e-18 Identities = 89/109 (82%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 62614 TATCCGCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTTAACTCTCTGACTCCG 62673 ||||| || ||||| ||||||||||| |||||||| || || ||||||||||||||| Sbjct 48828 TATCCACAACTGACTATCCGTGTATCGGGTTATGCGGTGCGTTTTAACTCTCTGACTAAA 48887 Query 62674 GAACAGCAGCGCGACGTTATCGCTCGTACCTTCACCGAGAGTTTGTAAT 62722 |||||||||| |||||||| ||||||| |||||| | | |||||| Sbjct 48888 GAACAGCAGCAAGACGTTATTACTCGTACTTTCACCAGTACTCTGTAAT 48936 >seq613 Length=31296 Score = 82.4 bits (90), Expect = 8e-11 Identities = 88/112 (79%), Gaps = 6/112 (5%) Strand=Plus/Minus Query 1088 CGCTCTACCAAACTGAGCTACACGGAGTAAATTAAATTTGAGCGGATAATGAGAATCGAA 1147 ||||||||||| |||||||| | || | || || |||||| | | |||||||| Sbjct 4254 CGCTCTACCAA-CTGAGCTATATC-AGCACATC---TTGGAGCGGGCAGCGGGAATCGAA 4200 Query 1148 CTCACATCATCAGATTGGAAGTCTGAGGTAATA-CCATTATACGATATCCGC 1198 | | ||||||||| ||||||| ||||||||||| |||||||||||| |||| Sbjct 4199 CCCGCATCATCAGCTTGGAAGGCTGAGGTAATAGCCATTATACGATGCCCGC 4148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546324301580400