Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_031077.1 Length=41760 Score E Sequences producing significant alignments: (Bits) Value seq599 150 5e-32 >seq599 Length=2526 Score = 150 bits (166), Expect = 5e-32 Identities = 242/343 (71%), Gaps = 10/343 (3%) Strand=Plus/Minus Query 11130 ACCATTCTGGCTAACCATCTTTTCCA--GAAACGCAGCATTGTTGACTGGTGTTTCTCTA 11187 ||||| ||||||| || || || || | || ||| ||| |||| ||| || |||| Sbjct 803 ACCATCATGGCTAATCACCTATTTCAACGCCAC-CAG-ATTATTGATTGGGCGTTTTCTA 746 Query 11188 TCGTTCCGTACTCCAGCGCCTTTTGCATTCGTGATGATGGAAAGTTGCTGGTGATGACCT 11247 | ||||| ||||| | ||||| || |||||||| || ||||| || || |||| | Sbjct 745 TTGTTCCTTACTCAATCGCCTGGTGTATTCGTGACGACGGAAAATTACTTTCATTGACGT 686 Query 11248 ATCTGCGTGATCAGCAGGTGTTTGCATGGGCGCCACAGTCCAGCGCCGGGAAATACGAAA 11307 | || | || ||||| || ||||| ||||||||||| | | |||| ||| ||| Sbjct 685 ACCTCAGAGAGCAGCAAGTATTTGCTTGGGCGCCACAAGAAACAGACGGGCAATTTGAAT 626 Query 11308 GCACATGCAGCATCAGTGAAGGGAATGAAGATGCGGTGTATTTCATCGTCAACCGCACAA 11367 || |||||| |||||||||| |||||||||||||| || ||||| || ||| | | Sbjct 625 CAACCTGCAGCGTCAGTGAAGGTAATGAAGATGCGGTTTACTTCATTGTGTGCCGTAAAG 566 Query 11368 T---CAACGGTCAGGTAGTCAGATACATCGAGCGACTTTCGAGTCGCATGTTTACCAACG 11424 | |||| || || | ||||| ||||| | |||||| | ||||| || Sbjct 565 TTGGTGGCGGTGAG---GTGCGTTACATAGAGCGTTTGAGTAGTCGCCTATTTACTAAGA 509 Query 11425 ATGAAGATGCGTTCTTTGTTGATTCAGGGCTGAGTTATGACGG 11467 || || || |||||||||||||| || || ||||||||||| Sbjct 508 CAGAGGACGCTTTCTTTGTTGATTCTGGTCTAAGTTATGACGG 466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133507684148132