Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_031117.1 Length=44885 Score E Sequences producing significant alignments: (Bits) Value seq165 89.7 1e-13 >seq165 Length=448888 Score = 89.7 bits (98), Expect = 1e-13 Identities = 171/249 (69%), Gaps = 6/249 (2%) Strand=Plus/Minus Query 32345 AAAGCTATAGCAAAAGAATTTGATTGTCCTGTTTTTTGTTTAGCGCAATTAAGCCGAAGC 32404 ||||| | |||||||| || || ||| || || ||| | || | | ||||||| Sbjct 62094 AAAGCATTGGCAAAAGAGTTGAATGTTCCGGTCGTTGCTTTGTCACAGCTTAACCGAAGC 62035 Query 32405 TTAGAATCCAGAAAAGATAGACGACCTCTAATGTCTGACATTCGTGAGTCGGGATCTATT 32464 ||||| | ||||| ||| ||| | | |||||| | ||||| || || ||||| Sbjct 62034 TTAGAGCAGCGTGCAGATAAACGCCCTGTGAACTCTGACTTACGTGAATCAGGCTCTATC 61975 Query 32465 GAAGAGGACGCAGATGTGATCATGTTTATATATCGTGATGAG---TATTATGATAAAAAC 32521 || |||| || || | || |||||||| |||||||||||| ||| | ||| || | Sbjct 61974 GAGCAGGATGCTGACCTTATTATGTTTATTTATCGTGATGAGGTTTATCACGAT-AATAG 61916 Query 32522 TCAAAGGATCAAGGTATTGCTGAAATAATTGTAGCTAAAGCGCGTGATGGTGAGGTTGGA 32581 | || || |||| |||||||||| ||| ||| ||| ||| ||||| |||| Sbjct 61915 TGAATTGA--AAGGGGTTGCTGAAATTATTTTAGGTAAGCAACGTAATGGTCCAATTGGT 61858 Query 32582 ACGGTTAGA 32590 |||||| || Sbjct 61857 ACGGTTCGA 61849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143507480729382