Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28]
1,713 sequences; 434,128,924 total letters
Query= NC_031946.1
Length=40443
Score E
Sequences producing significant alignments: (Bits) Value
seq165 150 5e-32
>seq165
Length=448888
Score = 150 bits (166), Expect = 5e-32
Identities = 246/352 (70%), Gaps = 7/352 (2%)
Strand=Plus/Plus
Query 26637 GCCACCAAGCATTTGCATGGTTCCACCAACGCCAACGATGACTTCGGTAGTGAACCGATC 26696
||| || | ||||||||| | || |||| ||| | ||||| || ||| | |||||
Sbjct 55448 GCCGCCTAACATTTGCATTGAACCGCCAATATTAACAACCACTTCTGTGGTGTAACGATC 55507
Query 26697 CTGTCTGCTTTGATCCTGCCATTTTCTTGTCCGCAATTTGCCTTCAAGATAAACCTCAGA 26756
|| | |||||||| ||||| || | ||| |||| ||||||| ||||| | ||
Sbjct 55508 TTGACCACTTTGATCTTGCCACTTACGTGTTTGCAAAGAACCTTCAATGTAAACTTGTGA 55567
Query 26757 ACCTTTTCGCAGATACTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATTACCACACGGTG 26816
|||||| |||||| |||| |||| ||| || | ||| ||| || || ||||||||
Sbjct 55568 GCCTTTTTTCAGATATTCGCCCGCAACTTCAGCTAATTTTCCGAAAATCACTACACGGTG 55627
Query 26817 CCACTCCGTCTGCTC---CTTTTGCTCTCCAGTTTGCTTATCACGCCATTGTTCTGACGT 26873
||| || || | || | || || || ||||||||||| ||||| ||| || ||
Sbjct 55628 CCATTCGGTTTTTTCACGCATT---TCACCGGTTTGCTTATCGCGCCAGCTTTCAGAAGT 55684
Query 26874 AGCAACTGTAAGGTTTGCAAATGCCGTTCCTGATGGGTGAATATCTGATTTCTGGATCAT 26933
|| | || |||||||| | || || | | || || | |||||| ||||| |
Sbjct 55685 TGCCAGAGTTAGGTTTGCCACAGCACCGCC-GTTAGGCATGTAACGGATTTCAGGATCTT 55743
Query 26934 GCCCAAGGCGACCAATAATGATCACCTTATTTACGCCTCTGCTTGCCATTTA 26985
|||| | | ||| |||| || || ||||||||||||||||| ||||||||
Sbjct 55744 GCCCCAAGTTACCGATAAGAATTACTTTATTTACGCCTCTGCTGGCCATTTA 55795
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 129293369876930
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |