Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_031946.1 Length=40443 Score E Sequences producing significant alignments: (Bits) Value seq165 150 5e-32 >seq165 Length=448888 Score = 150 bits (166), Expect = 5e-32 Identities = 246/352 (70%), Gaps = 7/352 (2%) Strand=Plus/Plus Query 26637 GCCACCAAGCATTTGCATGGTTCCACCAACGCCAACGATGACTTCGGTAGTGAACCGATC 26696 ||| || | ||||||||| | || |||| ||| | ||||| || ||| | ||||| Sbjct 55448 GCCGCCTAACATTTGCATTGAACCGCCAATATTAACAACCACTTCTGTGGTGTAACGATC 55507 Query 26697 CTGTCTGCTTTGATCCTGCCATTTTCTTGTCCGCAATTTGCCTTCAAGATAAACCTCAGA 26756 || | |||||||| ||||| || | ||| |||| ||||||| ||||| | || Sbjct 55508 TTGACCACTTTGATCTTGCCACTTACGTGTTTGCAAAGAACCTTCAATGTAAACTTGTGA 55567 Query 26757 ACCTTTTCGCAGATACTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATTACCACACGGTG 26816 |||||| |||||| |||| |||| ||| || | ||| ||| || || |||||||| Sbjct 55568 GCCTTTTTTCAGATATTCGCCCGCAACTTCAGCTAATTTTCCGAAAATCACTACACGGTG 55627 Query 26817 CCACTCCGTCTGCTC---CTTTTGCTCTCCAGTTTGCTTATCACGCCATTGTTCTGACGT 26873 ||| || || | || | || || || ||||||||||| ||||| ||| || || Sbjct 55628 CCATTCGGTTTTTTCACGCATT---TCACCGGTTTGCTTATCGCGCCAGCTTTCAGAAGT 55684 Query 26874 AGCAACTGTAAGGTTTGCAAATGCCGTTCCTGATGGGTGAATATCTGATTTCTGGATCAT 26933 || | || |||||||| | || || | | || || | |||||| ||||| | Sbjct 55685 TGCCAGAGTTAGGTTTGCCACAGCACCGCC-GTTAGGCATGTAACGGATTTCAGGATCTT 55743 Query 26934 GCCCAAGGCGACCAATAATGATCACCTTATTTACGCCTCTGCTTGCCATTTA 26985 |||| | | ||| |||| || || ||||||||||||||||| |||||||| Sbjct 55744 GCCCCAAGTTACCGATAAGAATTACTTTATTTACGCCTCTGCTGGCCATTTA 55795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129293369876930