Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq869 253 2e-62 seq1394 102 8e-17 >seq869 Length=1271022 Score = 253 bits (280), Expect = 2e-62 Identities = 479/693 (69%), Gaps = 10/693 (1%) Strand=Plus/Minus Query 23343 ATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTAC 23402 ||| || |||||||| ||||||| |||| || | | | || || ||||| | || || Sbjct 484139 ATCGGCCACAAATTCTATATATTCCGACATTAATTTACAATTCATGCCTATCAAATTGAC 484080 Query 23403 TGGAATCGCATCATATAAG-AATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAA 23461 || | ||||| | |||| ||| | |||||| || || || | || |||| || Sbjct 484079 GGGCAAAGCATC-TGTAAGGAATTCCTGTTCAATTTTCACCGCTTCAGTGATAATTTCAA 484021 Query 23462 CAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAACAATAA-ACATGCAAAATCA 23520 ||| ||| ||| || | | | |||| ||||||| ||| ||| ||||||||| Sbjct 484020 TAATTCTCTCTCGACTGGGACGTTGTACCAAATGTTTAAACATTAATACA-GCAAAATCA 483962 Query 23521 CAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAAT 23580 ||||||| || ||||| | ||||| ||||| || ||||| | || ||||| | Sbjct 483961 CAATGTAAACCCTCATCACGTGATATCAACTCATTGGAGAATGTAAGACCAGGCATAAGA 483902 Query 23581 CCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACA 23640 || ||||| || | |||||| || | |||||| || ||||||||||||||| ||| Sbjct 483901 CCACGTTTCTTTAGCCAAAAGATGGAAGCAAAACTGCCACTAAAGAAAATACCCTCTACA 483842 Query 23641 GCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATC--AGAAATCCAttttt 23698 || ||||| || | || |||| |||||| |||| | || || ||||||||| Sbjct 483841 GCAGCAAAAGCAATAATACGTTCACCAAAATTTGC-TGATT-TCGAAGAAATCCAAGCCA 483784 Query 23699 ttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAG 23758 ||| ||||| ||||| || ||| || |||||||| || || |||||| || Sbjct 483783 TTGCCCAATCGGCCTTACGCTTAACAGCTGGCATAGTTTCAATAGCATTAAAGAGATAAT 483724 Query 23759 TTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAA 23818 | |||| ||| | ||||| |||||||||| | ||||||||||||||| || | Sbjct 483723 CACGCTGTTCACGATCCTTAATATAACTATCAATTAGAATACTATACATTTCAGAGTGTA 483664 Query 23819 TATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCAT 23878 |||||| || ||||| ||||| ||||| ||||| | || || | | ||| || || | Sbjct 483663 CATTTTCCATGGCAATTTGAAAGCCATAGAAACAGCGTGCCTCTGTAACTTGTACTTCTT 483604 Query 23879 TAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAA 23938 | | || | || | | |||||| || ||||| ||||| ||| || |||||||||| Sbjct 483603 GAGAGAAACGTTCGACAAGATTTTCATTGACAATGCCATCGGAAGCGGCGAAGAAAGCAA 483544 Query 23939 GAACATATTTTATAAAATGTCTTTCATCAGTTGAT-AATTTTTTCCAATCATTAATATCT 23997 |||||| | || ||||| | |||| || | | | | ||| ||| || ||||| Sbjct 483543 GAACATGTGAAATGAAATGACGCTCAT-TGTCGGTGAGTCTTTCCCAGTCGGAGTTATCT 483485 Query 23998 TTTGATAAATCAACTTCATCAACTGTCCAAAAA 24030 || || | ||| ||||| || || ||||||||| Sbjct 483484 TTAGAAAGATCTACTTCTTCTACCGTCCAAAAA 483452 >seq1394 Length=309634 Score = 102 bits (112), Expect = 8e-17 Identities = 85/104 (82%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 139429 GGTGTCCTACATACAAAATTTTGGATTGTTGATAATAAACATATATATATTGGAAGTGCT 139488 ||||| ||||||||||||| |||||| ||| || |||||||| ||| | || ||||| Sbjct 287986 GGTGTTTTACATACAAAATTCTGGATTTCTGACAAAAAACATATTTATTTGGGCAGTGCC 287927 Query 139489 AACATGGACTGGCGATCACTAACTCAAGTAAAAGAATTAGGTAT 139532 || ||||||||| |||| |||| || || |||||||||||||| Sbjct 287926 AATATGGACTGGAGATCTTTAACGCAGGTTAAAGAATTAGGTAT 287883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521476833638200