Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq964 86.0 6e-12 >seq964 Length=291957 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || | ||| || |||| || || || || || ||||||||||| ||||| Sbjct 215866 CCACCACGCAAACGCAATACCAAGTGAAGGGTAGATTCTTTTTGAATGTTATAATCGGAT 215807 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||||| | || || | ||| || || ||||| |||| |||||||| || | |||| Sbjct 215806 AAAGTGCGGCCATCTTCCAACTGTTTACCAGCGAAAATCAAACGCTGTTGATCTGGGGGA 215747 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | || |||| | || |||| |||| ||| | | ||| || | || || Sbjct 215746 ATACCTTCTTTGT-CTTGGATTTTAGCTTTAACATTTTCTATAGTATCCGAAGGTTCAAC 215688 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| || || ||||||||||| | || || |||||||| |||||| Sbjct 215687 CTCCAATGTAATTGTTTTACCCGTTAATGTTTTAACGAAAATTTGCATG 215639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462294100915600