Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq74052 134 1e-26 >seq74052 Length=11856 Score = 134 bits (148), Expect = 1e-26 Identities = 458/709 (65%), Gaps = 16/709 (2%) Strand=Plus/Plus Query 16798 ATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTAC 16857 ||| || ||||||||||| |||| |||| |||| || ||||| ||||| | | || Sbjct 5452 ATCGGCCACAAATTCTATGTATTCTGACATCAATTTACAATTCATGCCTATCAAATTGAC 5511 Query 16858 CGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGC 16917 || | ||| || || | ||| ||| || || |||||||| | ||||| | Sbjct 5512 GGGCAAAGCATCTGTAAGGAATTCTTGTTCAATTTTCACCGCTTCGGTGATAATTTCAAT 5571 Query 16918 AACTCGTTCC----TCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAAT 16973 || || ||| | ||||| |||| | |||||||||||| | || |||| Sbjct 5572 AATTCTCTCCCGACTGGGACGTTGTACC----AAATGTTTAAACATTAATACCGCAAAAT 5627 Query 16974 CGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCT 17033 | |||||||| ||||| || | || | ||| || || ||||| | || ||||| Sbjct 5628 CACAATGTAAACCCTCATCACGTGAAATCAATTCATTGGAGAATGTAAGACCAGGCATAA 5687 Query 17034 TTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGA 17093 || |||||||||| ||| || || | ||| || ||| ||||| |||||||| | Sbjct 5688 GACCACGTTTCTTTAGCCAGAAGATGGAGGCAAAACTGCCACTGAAGAAAATACCCTCCA 5747 Query 17094 CGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCT 17153 | | ||||| || || | ||||| | | | || ||| |||||| | Sbjct 5748 CAGCAGCAAAAGCAATAATACGTTCACCAAAATTAGCCGATTTCGAGGAAATCCAAGCCA 5807 Query 17154 GCACCCACTCGGCTTTTTGCTTTATGCAATC--CATCGTTTCTATGGCCTTAAATAATTT 17211 |||| || || || |||| | || | ||| ||||| ||||| ||||| | | Sbjct 5808 TAGCCCAATCAGCCTTACGCTTAA--CAGCCGGCATAGTTTCAATGGCATTAAAGAGATA 5865 Query 17212 CTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTG 17271 || | || | || | ||||| |||| || || | || |||||||| ||||| Sbjct 5866 ATCACGCTGCTCGCGATCCTTAATATAACTATCAATTAGAATACTATACATTTCAGAGTG 5925 Query 17272 TATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTC 17331 || || |||||||| || || || || || || || || || || | | ||| ||||| Sbjct 5926 TACATTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGTGCCTCTGTAACTTGTACTTC 5985 Query 17332 CACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 | |||| ||||| | |||||||| || || ||||| ||| || || || || || Sbjct 5986 TTGGGAGAAGCGTTCAACAAGATTTTCATTGACAATGCCATCGGAAGCAGCAAAGAAAGC 6045 Query 17392 CAATATATGCTTAATGAAATATTTTTCGT--CCGGTGTAAGAACGCGCCAGTCCTTTAAA 17449 | | ||| |||||||| ||| | ||||| || |||||| Sbjct 6046 TAGAACATGTGAAATGAAATGACGTTCATTGTCGGTG--AGTCTTTCCCAGTCGGAATTG 6103 Query 17450 TCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCT 17498 |||||||| | |||||||||||| ||||||||| ||| | |||| Sbjct 6104 TCTTTGGAAAGATCCACTTCTTCTACAGTCCAAAAAGAAGCTTCGGCCT 6152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516949937361000