Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28]
92,075 sequences; 319,935,455 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq9860 495 4e-135
seq74052 273 3e-68
>seq9860
Length=13996
Score = 495 bits (548), Expect = 4e-135
Identities = 1396/2122 (66%), Gaps = 34/2122 (2%)
Strand=Plus/Plus
Query 52955 ATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATA 53014
||||| || || | || || ||||||| |||| | ||||| | ||| |||||||
Sbjct 9144 ATGAAAGCGCCACGATCGGCGGCCATTTGTATGGTGGTCTTAACGGAAATCTCCCAAACT 9203
Query 53015 GTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGT-TTGTATTC--TGAATAGATCCACC 53070
|| || || | || | || ||| || |||| | || ||| || || || || |
Sbjct 9204 GTCTTGTATAGATCACGTA-TATGTTTGGGAATTTCTTCTATGGCTTGTATGGAGCCGCG 9262
Query 53071 ATCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCT 53130
|| ||||| |||| || || ||||||| |||||| | ||||||||| || |
Sbjct 9263 ATTGGAAATAATTTTATTTTTCATTTCATCATCCCATAAATCAAGTTCGGTTAAATCTTT 9322
Query 53131 AAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATT 53190
||| | ||| |||| || || | |||||||| ||||| || | | ||||||||||||
Sbjct 9323 AAGCAAATGATGATTGACAACATTGAATTCTCCCGACAAAACACGTCTAGTGTAAATATT 9382
Query 53191 ACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGG 53250
||| |||||||| | || ||||| || || | |||||| || || || || || ||
Sbjct 9383 GGAGGTGTACGGTTCAAAGGATTCATTGTTGCCTAGAATTTGTGCGGTCGAAGCTGTGGG 9442
Query 53251 CATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTC--TGATTTTATCTTTTAGA 53308
||| || || | | ||| ||| | | ||| ||||| ||||||| || || |
Sbjct 9443 CATGGGGGCTAATAGCAAAGAATTGCGTACACC--ATGTTGCTTGATTTTCTCCTTCAAC 9500
Query 53309 GGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCG 53368
| ||| ||||| | || | ||| |||||| |||||
Sbjct 9501 TCTGACCAGTTCCACAAGTCTGTGGGTGTTTTATTCCACATATCGTATTGTAGTATACCC 9560
Query 53369 TTACTGGC-GTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACA 53427
||||| | | || | || ||| || || |||| || || || || || | ||||||
Sbjct 9561 TTACTTACTGGAC-AGCCGGGATAAGTTTCATATGTGCCATCTTTTTCGGCCAATTCACA 9619
Query 53428 ACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGC 53487
||| || || ||||| || |||||||| |||||||| |||| | ||||| ||
Sbjct 9620 ACTAGCTTCCAATGCGCCATAATAAATAGTTTCGAAAATCTGTTGATTTAACAAAAACGC 9679
Query 53488 --TTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACA 53545
|| || || ||| | || ||| | | ||| || | || || || || ||||||
Sbjct 9680 CTTTTCA--CTCTCATAGGGGTAACGCATTAAAATCAAAGTATCGGCAAAACCCTGAACA 9737
Query 53546 CCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTC--AGCTTCTGGAATAGGATAAT 53603
|| || || ||||| | ||| | | |||| || |||| ||| || || | |||||||
Sbjct 9738 CCTATGCCAATAGGACGATGACGCATATTGGA--TTTCCTAGCCTCAGGCAAGGGATAAT 9795
Query 53604 AATTAATATCTATAATTTTATTGAGGTTTCTGACAATTACTTTGACCACATCCTTCAGTT 53663
| ||||| || || ||||| ||||| || || ||| ||||| |||| |||| ||
Sbjct 9796 AGTTAATGTCGATGATTTTGTTGAGATTCTTGGTAATGACTTTAGTGACATTTTTCAATT 9855
Query 53664 TGAGAAAATCAAAT---TGTCCATCTATTACAAACATGTTCAATGCAATAGATGCCAGAT 53720
| ||||||||| | | | | | |||||||| || | || || || |||| ||
Sbjct 9856 TTTTAAAATCAAAGGTCTTTTCTGGTGTGACAAACATATTAAGGGCTATGGAGGCCAAAT 9915
Query 53721 TACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTAC 53780
|||||||||||| ||||| || | | ||||| || ||||| ||||| | || || |
Sbjct 9916 TACAAACGGCTATCTCATCAGGGGCAGAATATTCTACAATCTCTGTGCACAAGTTGCTGC 9975
Query 53781 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 53840
|||| ||||| || | |||||| || ||||| || ||| || ||||| ||||| | |
Sbjct 9976 ACTTAATGGTGCCAATATTTTGCTGGTTACTTTTGCGGTTGCAGGCATCTTTATACAACA 10035
Query 53841 TGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCT 53900
| | || ||||| ||||| | |||| ||| || || || ||| | | ||||||
Sbjct 10036 TATAGGGAGTACCGGTTTCTACTTGGGCTTCAATTATAGCAAACCAAAGAGCCTGAGCCT 10095
Query 53901 TTATTATA-GATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCG 53959
| | | |||| | | | || || |||| || ||||||||| ||| || ||
Sbjct 10096 TGACAGTGCGATTGGCCTTACCTT-CTTTTTCATACTTGGTATACAATTCTTCGAATTCC 10154
Query 53960 TCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCG 54019
|| |||||||||| | || || ||||||| | |||||||| | ||||| || ||
Sbjct 10155 TCACCCCAAACATCCTGCAGACCGGGACATTTGTGAGGACACATTAGGGACCAGTCACCA 10214
Query 54020 TCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCT 54078
| || | ||| ||||||||||| | || || ||||| | ||| ||| || ||||||||
Sbjct 10215 TTTTCTTCCACACGTTTCATAAACAAGTCGGGTATCCACAAAGC-ATAGAAAAGATCTCT 10273
Query 54079 GGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGA 54138
|| ||| || || || || || || || || || | ||| | || | | |||||| ||
Sbjct 10274 GGCTCTGTGCTCTTCCTTGCCGGTGTTTTTCTTTAAATCCAAAAATTCAAAAATATCTGA 10333
Query 54139 ATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTAT 54198
|||||| || ||||| || || | | | ||||| |||||| || |||||||| |
Sbjct 10334 ATGCCAAGGCTCCAAATAAATAGCAAAGGCACCAGGGCGTTTGCCACCACCCTGATCAAC 10393
Query 54199 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATT 54258
|| | || || ||| | || || | |||||| | | |||||| || | || ||
Sbjct 10394 ATAACGGGCCACATTGTTAAACACCCTAAGCATTGGTACCAGACCATTTGAGGTGCCGTT 10453
Query 54259 GGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACCTATCCCC 54316
|| ||| || | | || | || | ||| | | | ||| || || || ||
Sbjct 10454 AGTGCCGTCAATGGAAGTGCCCTTAGCTCTAATGCAGTGCACATT--TATGCCAATACCA 10511
Query 54317 CCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTA 54376
|| || ||| || || | || ||| ||| | | | | || ||||| ||| |
Sbjct 10512 CCCGCTGATTTGGAAATCATGGCACATTGTTCCACTGACTTGAAAATACCCTCAATAGAA 10571
Query 54377 TCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTA 54436
|| ||| |||| | | | || || |||| || | | | | || | || |
Sbjct 10572 TCGGCCACCATGGTCAACAAGAAGCATGACGACAACTGCGGTCTATTGGTAGCGGCCGCA 10631
Query 54437 AATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATA 54496
|| || ||||| ||||| || ||||| | ||||| | | ||| || || || |||
Sbjct 10632 AACAATGTAGGTGAAGCATGAGTAAAATAACGCTCAGACAACAAATTATAAGTTTCAATA 10691
Query 54497 GCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGT 54556
|| || || ||||| | ||| || |||| || || | ||||||||| ||||| |||
Sbjct 10692 GCCGAATCAATATCATCTCCATGTATACCTATAGCTACTCTCATTAACATATGCTGTGGT 10751
Query 54557 CTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCA 54616
|| ||||| ||||| || ||||||||||| || ||| | |||| || || || ||
Sbjct 10752 CTCTCAACAATCTTACCATTCATTTTCAGCAAATAAGATCTCTCCAGTGTCTTGAAGCCG 10811
Query 54617 AAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATAT 54676
|| |||||||| |||||| || || |||||||| || || | || || |
Sbjct 10812 AAGTAGTTGTAGCCAAAGTCACGATCATAAATAATTGACGAATTTAAACGTTCTGCATTT 10871
Query 54677 TTGTTAACTACATCCATGGTAATACT-TGAAATAATCGGAGAATGTTTCCCATTTTTAGG 54735
|| | ||||||| | || || | ||||| | || || || |||| | |
Sbjct 10872 TTCTGCACTACAT-TGTAGTGGTATTCGGAAATCAAAGGCGATGGTCTCCCCGTCTCTTT 10930
Query 54736 ATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTG 54795
||| ||| | | | | | ||| | || || || |||| |||||| |||||||||||
Sbjct 10931 ATTAACAAAATGATACAGATCACTTATAACCTCTGAGAATACTTTTTTCGTTTCTTTGTG 10990
Query 54796 TAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACA 54855
| ||| ||||| || || | ||| || | ||||||||||| ||| | ||||| |
Sbjct 10991 CAAATTGGATACTGCAATACGAGCTGCCAATATGGCATAATCGCCATGATTAGTAGTTAA 11050
Query 54856 AGTGGCTGCTATTTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATAT 54915
|| || || | || || | || | | || | |||| || || || ||| || |
Sbjct 11051 TGTAGCAGCAGTCTCTGCCGCCAAATTATCTAGTTCTTGTGTAGTAACACCACAGTAAAG 11110
Query 54916 TCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATA 54975
|| | || ||||||| | || | ||||| | ||| | || ||||||||
Sbjct 11111 GCCATTAATTACCTTCAGTGTAATGGCCACTGGATCAACGAAATCCATATTCAAGCCATA 11170
Query 54976 ACATAATTTTCTAATACGAGATGTGATTTTATCAAACATG-ACATTTTCCTTGTATCCAT 55034
|||| ||| ||| || ||||| |||||||| || ||| || | ||||||| |||||
Sbjct 11171 GCATAGCTTTTGAATTCGTGATGTTATTTTATCGAA-ATGAACCTCTTCCTTGCGTCCAT 11229
Query 55035 TTCGTTTAATGACAAACATTTT 55056
|||||||| ||||||| |||
Sbjct 11230 CTCGTTTAAGAACAAACAATTT 11251
>seq74052
Length=11856
Score = 273 bits (302), Expect = 3e-68
Identities = 500/726 (69%), Gaps = 15/726 (2%)
Strand=Plus/Plus
Query 23950 CCAATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAAT 24009
||||||| | ||| | ||| || ||||| || || ||| | ||||| || |||||
Sbjct 5433 CCAATTCCACTAGCAAACGATCGGCCACAAATTCTATGTATTCTGACATCAATTTACAAT 5492
Query 24010 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 24069
|||| ||||| | || || || | ||| | ||||| |||||||||||||| ||||
Sbjct 5493 TCATGCCTATCAAATTGACGGGCAAAGCATCTGTAAGGAATTCTTGTTCAATTTTCACCG 5552
Query 24070 CGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACA 24129
| || || ||||| | | | | || ||| || | | | |||||||||||||
Sbjct 5553 CTTCGGTGATAATTTCAATAATTCTCTCCCGACTGGGACGTTGTACCAAATGTTTAAACA 5612
Query 24130 TCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACG 24189
| || || ||||| || |||| |||||| || | ||| ||||| ||||| || |
Sbjct 5613 TTAATACCGCAAAATCACAATGTAAACCCTCATCACGTGAAATCAATTCATTGGAGAATG 5672
Query 24190 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAA 24249
| || || ||||| || ||||| || || ||||| || ||||| ||||| ||| |
Sbjct 5673 TAAGACCAGGCATAAGACCACGTTTCTTTAGCCAGAAGATGGAGGCAAAACTGCCACTGA 5732
Query 24250 AGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAA-CCGGCGCTGTCA 24308
||||||| || || || || ||||| ||||||| | ||| ||| || | || | ||
Sbjct 5733 AGAAAATACCCTCCACAGCAGCAAAAGCAATAATACGTTCACCAAAATTAGCCGATTTCG 5792
Query 24309 TG--TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAG 24366
| ||||| ||||||||| ||||| || ||| ||||| || || || |
Sbjct 5793 AGGAAATCCAAGCCATAGCCCAATCAGCCTTACGCTTAACAGCCGGCATAGTTTCAATGG 5852
Query 24367 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTAT 24426
||||||||||||| | | | | ||| |||| ||| ||||||| | || |||||
Sbjct 5853 CATTAAAGAGATAATCACGCTGCTCGCGATCCTTAATATAACTATCAATTAGAATACTAT 5912
Query 24427 ACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGG 24486
||||||| || || | ||||| ||||| ||||| || || |||||||| | ||||| |
Sbjct 5913 ACATTTCAGAGTGTACATTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGTGCCTCTG 5972
Query 24487 TAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGG 24546
||| ||||||||| | || ||||| | | ||||||||| || || || || |
Sbjct 5973 TAACTTGTACTTCTTGGGAGAAGCGTTCAACAAGATTTTCATTGACAATGCCATCGGAAG 6032
Query 24547 CTGCAAAAAACGCCAATACATGTTTTATAAAAT---ATTTTTCGTCTGGTGTTAGTTTAT 24603
| ||||| || || | |||||| || |||| || | ||| |||| ||| | |
Sbjct 6033 CAGCAAAGAAAGCTAGAACATGTGAAATGAAATGACGTTCATTGTC-GGTG--AGTCTTT 6089
Query 24604 TCCAATC---ATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCT 24660
||| || |||| ||||| || | |||||||||||| || |||||||| || || |
Sbjct 6090 CCCAGTCGGAATTG---TCTTTGGAAAGATCCACTTCTTCTACAGTCCAAAAAGAAGCTT 6146
Query 24661 CTGCCT 24666
| ||||
Sbjct 6147 CGGCCT 6152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593038263546000
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |