Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq43370 89.7 4e-13 seq10127 89.7 4e-13 >seq43370 Length=3724 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || ||| ||||||| || || || |||||||||||| ||| || || | Sbjct 2362 ATGCAGATCTTCGTCAAAACTTTAACTGGTAAAACCATTACCTTGGAAGTCGAGCCTTCC 2421 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | ||| ||||| || ||||||||| | ||| ||||||| Sbjct 2422 GACACCATTGAAAATGTCAAGGCCAAAATCCAAGACAAAGAAGGTATCCCCCCAGATCAA 2481 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||| | | ||||| || || |||||| |||||||| || || |||| ||||| Sbjct 2482 CAACGTTTGATCTTCGCTGGTAAACAATTGGAAGATGGTCGCACCTTGTCCGACTACAAC 2541 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGT 29170 || || |||||||| ||| | || |||| Sbjct 2542 ATCCAAAAGGAATCCACTTTACATTTGGT 2570 >seq10127 Length=8452 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 ||||| |||||| | || ||| |||||| | || |||||||| || |||||| ||||| Sbjct 7813 GATAAGGAAGGTATTCCTCCAGACCAACAACGTCTGATCTTTGCTGGTAAACAATTGGAA 7754 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 ||| | || | | || ||||| || || |||||||||||||| ||| |||| || Sbjct 7753 GATGGCCGCACCCTTTCGGACTACAACATCCAAAAGGAATCTACTCTCCACTTGGTTTTG 7694 Query 29175 CGATTACGAGGAGG 29188 || ||||| || || Sbjct 7693 CGTTTACGTGGTGG 7680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427855336734125