Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq76450 105 1e-17 >seq76450 Length=4187 Score = 105 bits (116), Expect = 1e-17 Identities = 254/377 (67%), Gaps = 12/377 (3%) Strand=Plus/Plus Query 189170 TTATCTCCGTGGCTACATTTTGGTCATGTATCCGCACAACGTGTTGC--CTTAGAAGTAT 189227 ||||| || ||| | ||||||||||| | || | |||||| ||| ||| || || Sbjct 476 TTATCGCCTTGGTTTCATTTTGGTCAGATTTCAGTGCAACGT--TGCATCTTGGAGGT-- 531 Query 189228 TAAAATGTATACGAG-AAAGCaaaaaaaaC-GTTGAAACGTTTATAGATGAAATAATTGT 189285 |||| ||||| | ||| || | | || ||| | ||| || ||| |||||| Sbjct 532 TAAAGAGTATAAAACTAAATTTAAGGATTCTGTGGAAGCATTTTGTGAAGAAGCAATTGT 591 Query 189286 AAGAAGAGAACTATCGGATAATTTTTGTTACTATAACAAACATTATGATAGTATCCA--G 189343 ||| ||||| | |||||||||||||||| || |||| | | ||||| | | | || | Sbjct 592 TAGACGAGAATTGGCGGATAATTTTTGTTATTACAACAGAAACTATGACAATCTTCAAGG 651 Query 189344 TCTACTCATTCATGGGCCAGAAAAACATTAGAAGATCACATTAATGATCCTAGAAAGTAT 189403 | ||| || | ||||| |||||| | | ||||| || ||| | | | Sbjct 652 TTTAC--ATGCTTGGGCAGCTAAAACACTTAATGATCATCGCAAAGATAAGCGTAGTCCT 709 Query 189404 ATATATTCCATTAAACAACTCGAAAAAGCGGAAACTCATGATCCTCTATGGAACGCGTCA 189463 ||| | || || || | ||||| | ||||||||| | ||||||| | | Sbjct 710 TGCTATACAATGGAAGAATTTGAAAAGTCACGCACTCATGATGATTTATGGAATTCTGCT 769 Query 189464 CAAATGCAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTATTGGGCTAAG 189523 ||| ||||| |||| | ||||| ||||||||| | ||||| || ||||||||||||||| Sbjct 770 CAACTGCAGCTGGTTAATGAAGGTAAAATGCATGGCTTTTTGCGCATGTATTGGGCTAAG 829 Query 189524 AAGATACTTGAATGGAC 189540 || || | || ||||| Sbjct 830 AAAATCTTAGAGTGGAC 846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 922134258183000