Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq82145 109 8e-19 seq10922 95.1 2e-14 seq43370 86.0 9e-12 >seq82145 Length=1636 Score = 109 bits (120), Expect = 8e-19 Identities = 98/123 (80%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 146065 TAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATC 146124 |||||||||||| || ||||||||||| |||||||||||| || | || | | || Sbjct 1383 TAATACCAAATGCAATGTAGATTCTTTTTGTATATTATAATCAGACAATGTGCGCCCGTC 1324 Query 146125 ATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATC 146184 || |||||||| |||||||||||||| | ||| ||||| || || |||||||| || || Sbjct 1323 TTCCAATTGTTTGCCAGCAAAAATCAAACGTTGTTGATCTGGTGGGATTCCTTCCTTGTC 1264 Query 146185 TTG 146187 ||| Sbjct 1263 TTG 1261 >seq10922 Length=8781 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||| | ||| | ||||| || || | | | ||||| || ||||| ||||| || Sbjct 3007 CCACCACGAAGACGCAATACTAAGTGCAGAATGGATTCCTTTTCAATATTGTAATCCGAG 3066 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || || | | ||| || |||||||||||||| |||||||| | ||| ||||| || ||| Sbjct 3067 AGGGTACGACCATCTTCCAATTGTTTTCCAGCGAAAATCAAACGTTGTTGATCTGGTGGA 3126 Query 146171 ATTCCTTCTTTATCTTG 146187 ||||||||||| || || Sbjct 3127 ATTCCTTCTTTGTCCTG 3143 >seq43370 Length=3724 Score = 86.0 bits (94), Expect = 9e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||| | ||| | | ||||||||||||||| ||||| || || || || || || Sbjct 2588 CCACCACGAAGACGGAGTACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 2529 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | || | | ||| || |||||||| ||||| || ||||| | ||| ||||| || || Sbjct 2528 AAGGTGCGACCATCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGTTGATCTGGGGGG 2469 Query 146171 ATTCCTTCTTTATCTTG 146187 || |||||||| ||||| Sbjct 2468 ATACCTTCTTTGTCTTG 2452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 742670647584000