Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq8915 114 1e-20 >seq8915 Length=10834 Score = 114 bits (126), Expect = 1e-20 Identities = 231/343 (67%), Gaps = 0/343 (0%) Strand=Plus/Minus Query 20431 CAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATG 20490 ||||| || || || ||| |||| | || ||||| |||||||||| ||||| ||| Sbjct 9317 CAATTCTATGTGGCCAATGGTGAACTATCATGTCAGTTGTATCAACGCAGTGCTGACATG 9258 Query 20491 GGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACAT 20550 || || || || || || ||||| || ||||| | || || ||||||||||| ||| Sbjct 9257 GGTCTTGGAGTGCCATTTAATATAGCTTCATATGCTTTACTAACATATATGATTGCTCAT 9198 Query 20551 GTTACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTT 20610 |||| | ||| ||| | || || || | || |||| || || | ||| |||| Sbjct 9197 ATTACCGGTTTGAAACCAGGAGATTTTATTCATACCACTGGTGATACCCATGTTTATAAG 9138 Query 20611 AATCATATAGAACCTTTAAAATTACAGTTAACACGACAACCAAAACAATTCCCAACTCTT 20670 |||||||| |||||||| || ||| ||| ||| |||| | ||||| | | Sbjct 9137 AATCATATTGAACCTTTGAAGGAACAACTAAAACGTAAACCTCGTCCTTTCCCTAAATTG 9078 Query 20671 CGCATTACTCGAACTGTTAAAGATATTAACGATTTTAAAGCTGATGATTTTGTGTTAGAA 20730 | ||| | || ||||| ||||| | ||||| ||| ||| ||||||| | | Sbjct 9077 CTCATAAAACGTGAAGTTAAGGATATAGAGGATTTCAAATTTGAAGATTTTGAAATTGTC 9018 Query 20731 GGTTATAATCCCCATAATTCAATTCCAATGGAAATGTCTGTTT 20773 || ||||| || || ||| |||||||||| |||||| Sbjct 9017 GGCTATAAACCTTATCCAAAAATAGAAATGGAAATGGCTGTTT 8975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398736050060875