Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq10127 96.9 3e-15 >seq10127 Length=8452 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| || ||||||||||| ||||||||||| || ||| | || || ||| | | Sbjct 7360 ATGCAGATTTTCGTTAAAACCTTGACCGGCAAAACTATCACCTTGGAAGTTGAACCTTCC 7301 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 || | | || | || |||| ||||| | || ||||| | || || ||| Sbjct 7300 GATACCATTGAGAACGTGAAGGCTAAAATCCAGGATAAGGAAGGTATTCCCCCAGATCAG 7241 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 |||||||| || | || ||||||||| |||||||| || | || |||| | Sbjct 7240 CAACGTTTGATCTTCGCCGGCAAACAATTGGAAGATGGACGCACCCTTTCTGACTACAAC 7181 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059 || ||||| || |||| || |||||||| || || ||||| || ||| Sbjct 7180 ATCCAGAAGGAATCCACCCTCCATTTAGTATTGCGTTTGCGTGGTGGT 7133 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 ||||| || || || || ||||| ||||| ||||| || ||| | || ||||| | Sbjct 7132 ATGCAAATCTTCGTAAAGACCTTGACCGGTAAAACCATCACCTTGGAAGTCGAGCCTTCG 7073 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | | |||| || |||| || || | || ||||| | || || ||| Sbjct 7072 GACACTATTGAAAACGTCAAGGCTAAGATCCAGGATAAGGAAGGTATTCCTCCAGATCAG 7013 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 |||||||| || | ||| ||||||||| |||||||| ||| || || |||| | Sbjct 7012 CAACGTTTGATCTTTGCCGGCAAACAATTGGAAGATGGTCGCACTTTGTCTGACTACAAC 6953 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGG 25058 || || || ||| |||| || ||||| ||| |||| | || ||||| Sbjct 6952 ATCCAAAAGGAGTCCACCCTCCATTTGGTGCTACGTCTTCGTGGAGG 6906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 417834594284000