Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28]
92,075 sequences; 319,935,455 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq9860 479 4e-130
seq74052 264 1e-65
seq14616 105 8e-18
>seq9860
Length=13996
Score = 479 bits (530), Expect = 4e-130
Identities = 1391/2120 (66%), Gaps = 30/2120 (1%)
Strand=Plus/Plus
Query 62193 ATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATA 62252
||||| || || | || || ||||||| |||| | ||||| | ||| |||||||
Sbjct 9144 ATGAAAGCGCCACGATCGGCGGCCATTTGTATGGTGGTCTTAACGGAAATCTCCCAAACT 9203
Query 62253 GTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGT-TTGTATTC--TGAATGGATCCACC 62308
|| || || | || | || ||| || |||| | || ||| || ||||| || |
Sbjct 9204 GTCTTGTATAGATCACGTA-TATGTTTGGGAATTTCTTCTATGGCTTGTATGGAGCCGCG 9262
Query 62309 ATCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCT 62368
|| ||||| |||| || || ||||||| |||||| | ||||||||| || |
Sbjct 9263 ATTGGAAATAATTTTATTTTTCATTTCATCATCCCATAAATCAAGTTCGGTTAAATCTTT 9322
Query 62369 AAGGAGATGCGGGTTAACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATT 62428
||| | ||| | || || || | ||||||||| ||||| || | | ||||||||||||
Sbjct 9323 AAGCAAATGATGATTGACAACATTGAATTCTCCCGACAAAACACGTCTAGTGTAAATATT 9382
Query 62429 ACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGG 62488
||| |||||||| | || ||||| || || | |||||| || || || || || ||
Sbjct 9383 GGAGGTGTACGGTTCAAAGGATTCATTGTTGCCTAGAATTTGTGCGGTCGAAGCTGTGGG 9442
Query 62489 CATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTC--TGATTTTATCTTTTAGA 62546
||| || || | | ||| ||| | | ||| ||||| ||||||| || || |
Sbjct 9443 CATGGGGGCTAATAGCAAAGAATTGCGTACACC--ATGTTGCTTGATTTTCTCCTTCAAC 9500
Query 62547 TGTTCCCAATTCCAAAGATCCGACGGTACAACANNNNNNNNNNNATATTGTAGAATACCG 62606
| | ||| ||||| | || | ||| | |||||||| |||||
Sbjct 9501 TCTGACCAGTTCCACAAGTCTGTGGGTGTTTTATTCCACATATCGTATTGTAGTATACCC 9560
Query 62607 TTACTGGC-GTACGATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACA 62665
||||| | | || | || ||| || ||||||| || || || || || | || |||
Sbjct 9561 TTACTTACTGGAC-AGCCGGGATAAGTTTCATATGTGCCATCTTTTTCGGCCAATTCACA 9619
Query 62666 ACTCGCCTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGC 62725
||| || || ||||| || |||||||| ||||| || |||| | ||||| ||
Sbjct 9620 ACTAGCTTCCAATGCGCCATAATAAATAGTTTCGAAAATCTGTTGATTTAACAAAAACGC 9679
Query 62726 TTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACC 62785
| || ||| | || ||| | | ||| || | || || || || ||||||||
Sbjct 9680 CTTTTCACTCTCATAGGGGTAACGCATTAAAATCAAAGTATCGGCAAAACCCTGAACACC 9739
Query 62786 AATACCGATAGGTCTATGTCTCTTATTAGAGATTTC--AGCTTCTGGAATAGGATAATAA 62843
|| || ||||| | ||| | | |||| || |||| ||| || || | ||||||||
Sbjct 9740 TATGCCAATAGGACGATGACGCATATTGGA--TTTCCTAGCCTCAGGCAAGGGATAATAG 9797
Query 62844 TTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTG 62903
||||| || || ||||| |||||||| || ||| ||||| |||| |||| |||
Sbjct 9798 TTAATGTCGATGATTTTGTTGAGATTCTTGGTAATGACTTTAGTGACATTTTTCAATTTT 9857
Query 62904 AGAAAATCAAATCGCCCATCTATT---ACAAACATGTTCAATGCAACAGATGCCAGATTA 62960
||||||||| | ||| | |||||||| || | || | || |||| ||||
Sbjct 9858 TTAAAATCAAAGGTCTTTTCTGGTGTGACAAACATATTAAGGGCTATGGAGGCCAAATTA 9917
Query 62961 CACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACAC 63020
|| ||||||| ||||| || | | ||||| || ||||| ||||| | || || |||
Sbjct 9918 CAAACGGCTATCTCATCAGGGGCAGAATATTCTACAATCTCTGTGCACAAGTTGCTGCAC 9977
Query 63021 TTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATG 63080
|| || || || | |||||| || ||||| || ||| || ||||| ||||| | ||
Sbjct 9978 TTAATGGTGCCAATATTTTGCTGGTTACTTTTGCGGTTGCAGGCATCTTTATACAACATA 10037
Query 63081 AATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTT 63140
| |||||||| ||||| | || | ||| || || || ||| | | |||||||
Sbjct 10038 TAGGGAGTACCGGTTTCTACTTGGGCTTCAATTATAGCAAACCAAAGAGCCTGAGCCTTG 10097
Query 63141 ATTATA-GATTTGTATCTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTC 63199
| | |||| | | |||| || |||| || ||||||||| |||||| || ||
Sbjct 10098 ACAGTGCGATTGGCCTTACCTT-CTTTTTCATACTTGGTATACAATTCTTCGAATTCCTC 10156
Query 63200 TCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTC 63259
|||||||||| | || | ||||||| | |||||||| | ||||| || || |
Sbjct 10157 ACCCCAAACATCCTGCAGACCGGGACATTTGTGAGGACACATTAGGGACCAGTCACCATT 10216
Query 63260 ATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTTG 63318
|| | ||| ||||||||||| | || || ||||| | ||| ||| || |||||||| |
Sbjct 10217 TTCTTCCACACGTTTCATAAACAAGTCGGGTATCCACAAAGC-ATAGAAAAGATCTCTGG 10275
Query 63319 TTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAAT 63378
||| || || || || || || || || || | ||| | || | | |||||| ||||
Sbjct 10276 CTCTGTGCTCTTCCTTGCCGGTGTTTTTCTTTAAATCCAAAAATTCAAAAATATCTGAAT 10335
Query 63379 GCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGT 63438
|||| || ||||| || || || | | ||||| |||||| || |||||||| | |
Sbjct 10336 GCCAAGGCTCCAAATAAATAGCAAAGGCACCAGGGCGTTTGCCACCACCCTGATCAACAT 10395
Query 63439 ATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGG 63498
| | || || ||| | || || | |||||| | | ||| ||||| | || || |
Sbjct 10396 AACGGGCCACATTGTTAAACACCCTAAGCATTGGTACCAGACCATTTGAGGTGCCGTTAG 10455
Query 63499 TACCGGAGATATAGCCTCCACTGGCACGAAT--ATTACTAATTGATAGACCTATTCCCCC 63556
| ||| || | || | || | ||| | | | ||| || || || || ||
Sbjct 10456 TGCCGTCAATGGAAGTGCCCTTAGCTCTAATGCAGTGCACATT--TATGCCAATACCACC 10513
Query 63557 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATC 63616
|| ||| || || | || ||| ||| | | | | || || || || |||
Sbjct 10514 CGCTGATTTGGAAATCATGGCACATTGTTCCACTGACTTGAAAATACCCTCAATAGAATC 10573
Query 63617 ATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAA 63676
| | |||| | | | || || |||| || | | | | || | || |||
Sbjct 10574 GGCCACCATGGTCAACAAGAAGCATGACGACAACTGCGGTCTATTGGTAGCGGCCGCAAA 10633
Query 63677 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGC 63736
|| ||||| ||||| || ||||| | ||||| | | ||| || || ||||||||
Sbjct 10634 CAATGTAGGTGAAGCATGAGTAAAATAACGCTCAGACAACAAATTATAAGTTTCAATAGC 10693
Query 63737 TGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCT 63796
|| || ||||| | ||| || |||| || || | ||||||||| ||||| |||||
Sbjct 10694 CGAATCAATATCATCTCCATGTATACCTATAGCTACTCTCATTAACATATGCTGTGGTCT 10753
Query 63797 TTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 63856
|||||||| || || ||||||| ||| || ||| | |||| || || || || ||
Sbjct 10754 CTCAACAATCTTACCATTCATTTTCAGCAAATAAGATCTCTCCAGTGTCTTGAAGCCGAA 10813
Query 63857 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTT 63916
|||||||| |||||| || || |||||||| |||||| | || || |||
Sbjct 10814 GTAGTTGTAGCCAAAGTCACGATCATAAATAATTGACGAATTTAAACGTTCTGCATTTTT 10873
Query 63917 GTTAACTATATCCATGGTAATACT-TGAAATAATCGGAGAATGTTTCCCATTTTTAGGAT 63975
| |||| || | || || | ||||| | || || || |||| | | ||
Sbjct 10874 CTGCACTACAT-TGTAGTGGTATTCGGAAATCAAAGGCGATGGTCTCCCCGTCTCTTTAT 10932
Query 63976 TAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTA 64035
||||| | | | | ||| || || || |||| |||||| ||||| ||||| |
Sbjct 10933 TAACAAAATGATACAGATCACTTATAACCTCTGAGAATACTTTTTTCGTTTCTTTGTGCA 10992
Query 64036 GATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAG 64095
||| |||| || || | || || | ||||||||||| ||| | ||||| | |
Sbjct 10993 AATTGGATACTGCAATACGAGCTGCCAATATGGCATAATCGCCATGATTAGTAGTTAATG 11052
Query 64096 TGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTC 64155
| || || | || || |||| | | || | |||| || || || ||| || | |
Sbjct 11053 TAGCAGCAGTCTCTGCCGCCAAATTATCTAGTTCTTGTGTAGTAACACCACAGTAAAGGC 11112
Query 64156 CTTGAATAACCTTCATAGCTATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAGC 64215
| | ||| ||||||| | || | ||||| | |||| | || ||||||||||
Sbjct 11113 CATTAATTACCTTCAGTGTAATGGCCACTGGATCAACGAAATCCATATTCAAGCCATAGC 11172
Query 64216 ACAATTTTCTAATACGAGACGTGATTTTATCAAACATG-ACATTTTCCTTGTATCCATTT 64274
| | ||| ||| || || || |||||||| || ||| || | ||||||| ||||| |
Sbjct 11173 ATAGCTTTTGAATTCGTGATGTTATTTTATCGAA-ATGAACCTCTTCCTTGCGTCCATCT 11231
Query 64275 CGTTTAATGACAAACATTTT 64294
||||||| ||||||| |||
Sbjct 11232 CGTTTAAGAACAAACAATTT 11251
>seq74052
Length=11856
Score = 264 bits (292), Expect = 1e-65
Identities = 498/726 (69%), Gaps = 15/726 (2%)
Strand=Plus/Plus
Query 33397 CCAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAAT 33456
||||||| | ||| | ||| || || |||||||| ||| | ||||| || |||||
Sbjct 5433 CCAATTCCACTAGCAAACGATCGGCCACAAATTCTATGTATTCTGACATCAATTTACAAT 5492
Query 33457 TCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCG 33516
|||| ||||| | || || || | ||| | ||||| |||||||||||||| ||||
Sbjct 5493 TCATGCCTATCAAATTGACGGGCAAAGCATCTGTAAGGAATTCTTGTTCAATTTTCACCG 5552
Query 33517 CATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACA 33576
| | || ||||| ||| | || ||| || | |||| |||||||||||||
Sbjct 5553 CTTCGGTGATAATTTCAATAATTCTCTCCCGACTGGGACGTTGTACCAAATGTTTAAACA 5612
Query 33577 TCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACG 33636
| || || ||||| || || | |||||| || | ||| ||||| || || || |
Sbjct 5613 TTAATACCGCAAAATCACAATGTAAACCCTCATCACGTGAAATCAATTCATTGGAGAATG 5672
Query 33637 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAA 33696
| || || ||||| || ||||| || || ||||| || ||||| || || || |
Sbjct 5673 TAAGACCAGGCATAAGACCACGTTTCTTTAGCCAGAAGATGGAGGCAAAACTGCCACTGA 5732
Query 33697 AGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGC-GCTGTCA 33755
|||| || || || || |||||||| ||||||| | || ||| || || | | ||
Sbjct 5733 AGAAAATACCCTCCACAGCAGCAAAAGCAATAATACGTTCACCAAAATTAGCCGATTTCG 5792
Query 33756 TGTA--TCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGG 33813
| | |||| ||||||||| ||||| || ||| ||||| ||||| ||||
Sbjct 5793 AGGAAATCCAAGCCATAGCCCAATCAGCCTTACGCTTAACAGCCGGCATAGTTTCAATGG 5852
Query 33814 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTAT 33873
||||||||||||| | | | | ||| |||| |||| |||| || | || |||||
Sbjct 5853 CATTAAAGAGATAATCACGCTGCTCGCGATCCTTAATATAACTATCAATTAGAATACTAT 5912
Query 33874 ACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGG 33933
||||||| || || | ||||| ||||| || || || || |||||||| | ||||| |
Sbjct 5913 ACATTTCAGAGTGTACATTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGTGCCTCTG 5972
Query 33934 TAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGG 33993
||| || |||||| | || ||||| | | ||||||||| || || ||||| |
Sbjct 5973 TAACTTGTACTTCTTGGGAGAAGCGTTCAACAAGATTTTCATTGACAATGCCATCGGAAG 6032
Query 33994 CTGCAAAAAACGCCAATACATGTTTTATAAAAT---ATTTTTCGTCTGGTGTTAGTTTAT 34050
| ||||| || || | |||||| || |||| || | ||| |||| ||| | |
Sbjct 6033 CAGCAAAGAAAGCTAGAACATGTGAAATGAAATGACGTTCATTGTC-GGTG--AGTCTTT 6089
Query 34051 TCCAATC---ATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCT 34107
||| || |||| ||||| || | |||||||||||| || |||||||| || || |
Sbjct 6090 CCCAGTCGGAATTG---TCTTTGGAAAGATCCACTTCTTCTACAGTCCAAAAAGAAGCTT 6146
Query 34108 CTGCCT 34113
| ||||
Sbjct 6147 CGGCCT 6152
>seq14616
Length=5376
Score = 105 bits (116), Expect = 8e-18
Identities = 88/108 (81%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 28696 AATACCCAATTCCTTGACCTGAGTTAGTGATCTCCAATCCATGTTAGCGCTTCCTAAATA 28755
|||||||||||| || ||||| |||| |||||||| ||||| || || || || |||||
Sbjct 1340 AATACCCAATTCTTTAACCTGTGTTAAAGATCTCCAGTCCATATTGGCACTGCCCAAATA 1399
Query 28756 AATATGTGTATTATCAGATATCCAAAATTTTGTATGAAGAACTCCTCC 28803
||| ||| | ||||| || ||||||||||||||||| | ||| || ||
Sbjct 1400 AATGTGTTTGTTATCGGAAATCCAAAATTTTGTATGTAAAACACCACC 1447
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629092719306000
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