Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq9860 513 2e-140 seq74052 280 2e-70 seq14616 109 7e-19 >seq9860 Length=13996 Score = 513 bits (568), Expect = 2e-140 Identities = 1400/2122 (66%), Gaps = 34/2122 (2%) Strand=Plus/Plus Query 64986 ATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATA 65045 ||||| || || | || || ||||||| |||| | ||||| | ||| ||||||| Sbjct 9144 ATGAAAGCGCCACGATCGGCGGCCATTTGTATGGTGGTCTTAACGGAAATCTCCCAAACT 9203 Query 65046 GTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGT-TTGTATTC--TGAATGGATCCACC 65101 || || || | || | || ||| || |||| | || ||| || ||||| || | Sbjct 9204 GTCTTGTATAGATCACGTA-TATGTTTGGGAATTTCTTCTATGGCTTGTATGGAGCCGCG 9262 Query 65102 ATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCT 65161 || | ||||| |||| || || ||||||| |||||| | ||||||||| || | Sbjct 9263 ATTGGAAATAATTTTATTTTTCATTTCATCATCCCATAAATCAAGTTCGGTTAAATCTTT 9322 Query 65162 AAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATT 65221 ||| | ||| |||| || || | |||||||| ||||| || | | |||||||||||| Sbjct 9323 AAGCAAATGATGATTGACAACATTGAATTCTCCCGACAAAACACGTCTAGTGTAAATATT 9382 Query 65222 ACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGG 65281 ||| |||||||| | || ||||| || || | |||||| || || || || || || Sbjct 9383 GGAGGTGTACGGTTCAAAGGATTCATTGTTGCCTAGAATTTGTGCGGTCGAAGCTGTGGG 9442 Query 65282 CATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTC--TGATTTTATCTTTTAGA 65339 ||| || || | | ||| ||| | | ||| ||||| ||||||| || || | Sbjct 9443 CATGGGGGCTAATAGCAAAGAATTGCGTACACC--ATGTTGCTTGATTTTCTCCTTCAAC 9500 Query 65340 GGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCG 65399 | ||| ||||| | || | ||| |||||| ||||| Sbjct 9501 TCTGACCAGTTCCACAAGTCTGTGGGTGTTTTATTCCACATATCGTATTGTAGTATACCC 9560 Query 65400 TTACTGGC-GTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACA 65458 ||||| | | || | || ||| || || |||| || || || || || | |||||| Sbjct 9561 TTACTTACTGGAC-AGCCGGGATAAGTTTCATATGTGCCATCTTTTTCGGCCAATTCACA 9619 Query 65459 ACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGC 65518 ||| || || ||||| || |||||||| |||||||| |||| | ||||| || Sbjct 9620 ACTAGCTTCCAATGCGCCATAATAAATAGTTTCGAAAATCTGTTGATTTAACAAAAACGC 9679 Query 65519 --TTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACA 65576 || || || ||| | || ||| | | ||| || | || || || || |||||| Sbjct 9680 CTTTTCA--CTCTCATAGGGGTAACGCATTAAAATCAAAGTATCGGCAAAACCCTGAACA 9737 Query 65577 CCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTC--AGCTTCTGGAATAGGATAAT 65634 || || || ||||| | ||| | | |||| || |||| ||| || || | ||||||| Sbjct 9738 CCTATGCCAATAGGACGATGACGCATATTGGA--TTTCCTAGCCTCAGGCAAGGGATAAT 9795 Query 65635 AATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTT 65694 | ||||| || || ||||| |||||||| || ||| ||||| |||| |||| || Sbjct 9796 AGTTAATGTCGATGATTTTGTTGAGATTCTTGGTAATGACTTTAGTGACATTTTTCAATT 9855 Query 65695 TGAGAAAATCAAATCGCTCATCTATT---ACAAACATGTTCAATGCAACAGATGCCAGAT 65751 | ||||||||| || ||| | |||||||| || | || | || |||| || Sbjct 9856 TTTTAAAATCAAAGGTCTTTTCTGGTGTGACAAACATATTAAGGGCTATGGAGGCCAAAT 9915 Query 65752 TACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTAC 65811 |||||||||||| ||||| || | | ||||| || ||||| ||||| | || || | Sbjct 9916 TACAAACGGCTATCTCATCAGGGGCAGAATATTCTACAATCTCTGTGCACAAGTTGCTGC 9975 Query 65812 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 65871 |||| ||||| || | |||||| || ||||| || ||| || ||||| ||||| | | Sbjct 9976 ACTTAATGGTGCCAATATTTTGCTGGTTACTTTTGCGGTTGCAGGCATCTTTATACAACA 10035 Query 65872 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 65931 | | |||||||| ||||| | || | ||| || || || ||| | | |||||| Sbjct 10036 TATAGGGAGTACCGGTTTCTACTTGGGCTTCAATTATAGCAAACCAAAGAGCCTGAGCCT 10095 Query 65932 TTATTATA-GATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCG 65990 | | | |||| | | | || || |||| || ||||||||| |||||| || Sbjct 10096 TGACAGTGCGATTGGCCTTACCTT-CTTTTTCATACTTGGTATACAATTCTTCGAATTCC 10154 Query 65991 TCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCG 66050 || |||||||||| | || || ||||||| | |||||||| | ||||| || || Sbjct 10155 TCACCCCAAACATCCTGCAGACCGGGACATTTGTGAGGACACATTAGGGACCAGTCACCA 10214 Query 66051 TCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAAATCTCT 66109 | || | ||| ||||||||||| | || || ||||| | ||| ||| || | |||||| Sbjct 10215 TTTTCTTCCACACGTTTCATAAACAAGTCGGGTATCCACAAAGC-ATAGAAAAGATCTCT 10273 Query 66110 GGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATA 66169 || ||| || || || || || || || || || | ||| | || | | |||||| | Sbjct 10274 GGCTCTGTGCTCTTCCTTGCCGGTGTTTTTCTTTAAATCCAAAAATTCAAAAATATCTGA 10333 Query 66170 ATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTAT 66229 |||||| || ||||| || || || | | ||||| |||||| || |||||||| | Sbjct 10334 ATGCCAAGGCTCCAAATAAATAGCAAAGGCACCAGGGCGTTTGCCACCACCCTGATCAAC 10393 Query 66230 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATT 66289 || | || || ||| | || || | |||||| | | |||||| || || || || Sbjct 10394 ATAACGGGCCACATTGTTAAACACCCTAAGCATTGGTACCAGACCATTTGAGGTGCCGTT 10453 Query 66290 GGTCCCGGAGATATAGCTTCCACTTGCACGAAT--ATTACTAATTGATAGACCTATTCCC 66347 || ||| || | | || | || | ||| | | | ||| || || || || Sbjct 10454 AGTGCCGTCAATGGAAGTGCCCTTAGCTCTAATGCAGTGCACATT--TATGCCAATACCA 10511 Query 66348 CCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTA 66407 || || ||| || || | || ||| ||| | | | | || ||||| ||| | Sbjct 10512 CCCGCTGATTTGGAAATCATGGCACATTGTTCCACTGACTTGAAAATACCCTCAATAGAA 10571 Query 66408 TCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTA 66467 || ||| |||| | | | || || |||| || | | | | || | || | Sbjct 10572 TCGGCCACCATGGTCAACAAGAAGCATGACGACAACTGCGGTCTATTGGTAGCGGCCGCA 10631 Query 66468 AATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATA 66527 || || ||||| ||||| || ||||| | ||||| | | ||| || || |||||| Sbjct 10632 AACAATGTAGGTGAAGCATGAGTAAAATAACGCTCAGACAACAAATTATAAGTTTCAATA 10691 Query 66528 GCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGT 66587 || || || ||||| | ||| || |||| || || | ||||||||| ||||| ||| Sbjct 10692 GCCGAATCAATATCATCTCCATGTATACCTATAGCTACTCTCATTAACATATGCTGTGGT 10751 Query 66588 CTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCA 66647 || ||||| ||||| || ||||||| ||| || ||| | |||| || || || || Sbjct 10752 CTCTCAACAATCTTACCATTCATTTTCAGCAAATAAGATCTCTCCAGTGTCTTGAAGCCG 10811 Query 66648 AAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATAT 66707 || |||||||| |||||| || || |||||||| ||| || | || || | Sbjct 10812 AAGTAGTTGTAGCCAAAGTCACGATCATAAATAATTGACGAATTTAAACGTTCTGCATTT 10871 Query 66708 TTGTTAACTACATCCATGGTAATACT-TGAAATAATCGGAGAATGTTTCCCATTTTTAGG 66766 || | ||||||| | || || | ||||| | || || || |||| | | Sbjct 10872 TTCTGCACTACAT-TGTAGTGGTATTCGGAAATCAAAGGCGATGGTCTCCCCGTCTCTTT 10930 Query 66767 ATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTG 66826 ||| ||| | | | | ||| || || || |||| |||||| ||||||||||| Sbjct 10931 ATTAACAAAATGATACAGATCACTTATAACCTCTGAGAATACTTTTTTCGTTTCTTTGTG 10990 Query 66827 TAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACA 66886 | ||| ||||| || || | ||| || | ||||||||||| ||| | ||||| | Sbjct 10991 CAAATTGGATACTGCAATACGAGCTGCCAATATGGCATAATCGCCATGATTAGTAGTTAA 11050 Query 66887 AGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATAT 66946 || || || | || || |||| | | || | |||| || || || ||| || | Sbjct 11051 TGTAGCAGCAGTCTCTGCCGCCAAATTATCTAGTTCTTGTGTAGTAACACCACAGTAAAG 11110 Query 66947 TCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATA 67006 || | || ||||||| | || | ||||| | ||| | || |||||||| Sbjct 11111 GCCATTAATTACCTTCAGTGTAATGGCCACTGGATCAACGAAATCCATATTCAAGCCATA 11170 Query 67007 ACATAATTTTCTAATACGAGATGTGATTTTATCAAACATG-ACATTTTCCTTGTATCCAT 67065 |||| ||| ||| || ||||| |||||||| || ||| || | ||||||| ||||| Sbjct 11171 GCATAGCTTTTGAATTCGTGATGTTATTTTATCGAA-ATGAACCTCTTCCTTGCGTCCAT 11229 Query 67066 TTCGTTTAATGACAAACATTTT 67087 |||||||| ||||||| ||| Sbjct 11230 CTCGTTTAAGAACAAACAATTT 11251 >seq74052 Length=11856 Score = 280 bits (310), Expect = 2e-70 Identities = 498/723 (69%), Gaps = 9/723 (1%) Strand=Plus/Plus Query 35973 CCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAAT 36032 ||||||| | ||| | ||| || ||||||||||| ||| | ||||| || ||||| Sbjct 5433 CCAATTCCACTAGCAAACGATCGGCCACAAATTCTATGTATTCTGACATCAATTTACAAT 5492 Query 36033 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 36092 |||| ||||| | || || || | ||| | ||||| |||||||||||||| |||| Sbjct 5493 TCATGCCTATCAAATTGACGGGCAAAGCATCTGTAAGGAATTCTTGTTCAATTTTCACCG 5552 Query 36093 CGTCTGTTATAATAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACA 36152 | || || ||||| || | | | || ||| || | | | ||||||||||||| Sbjct 5553 CTTCGGTGATAATTTCAATAATTCTCTCCCGACTGGGACGTTGTACCAAATGTTTAAACA 5612 Query 36153 TCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACG 36212 | || || ||||| || |||| |||||| || | ||| ||||| ||||| || | Sbjct 5613 TTAATACCGCAAAATCACAATGTAAACCCTCATCACGTGAAATCAATTCATTGGAGAATG 5672 Query 36213 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAA 36272 | || || ||||| || ||||| || || ||||| || ||||| ||||| ||| | Sbjct 5673 TAAGACCAGGCATAAGACCACGTTTCTTTAGCCAGAAGATGGAGGCAAAACTGCCACTGA 5732 Query 36273 AGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAA-CCGGCACTGTCA 36331 ||||||| || || || || ||||| ||||||| | || ||| || | | | || Sbjct 5733 AGAAAATACCCTCCACAGCAGCAAAAGCAATAATACGTTCACCAAAATTAGCCGATTTCG 5792 Query 36332 TG--TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAG 36389 | ||||| ||||||||| ||||| || ||| ||||| || || || | Sbjct 5793 AGGAAATCCAAGCCATAGCCCAATCAGCCTTACGCTTAACAGCCGGCATAGTTTCAATGG 5852 Query 36390 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTAT 36449 ||||||||||||| | | | | ||| |||| ||| ||||||| | || ||||| Sbjct 5853 CATTAAAGAGATAATCACGCTGCTCGCGATCCTTAATATAACTATCAATTAGAATACTAT 5912 Query 36450 ACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGG 36509 ||||||| || || | ||||| ||||| ||||| || || |||||||| | ||||| | Sbjct 5913 ACATTTCAGAGTGTACATTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGTGCCTCTG 5972 Query 36510 TAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGG 36569 ||| ||||||||| | || ||||| | | ||||||||| || || || || | Sbjct 5973 TAACTTGTACTTCTTGGGAGAAGCGTTCAACAAGATTTTCATTGACAATGCCATCGGAAG 6032 Query 36570 CTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATTCC 36629 | ||||| || || | |||||| || |||| ||| || || ||| | | || Sbjct 6033 CAGCAAAGAAAGCTAGAACATGTGAAATGAAATGACGTTCATTGTCGGTGAGTCTTTCCC 6092 Query 36630 AATC---ATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTG 36686 | || |||| ||||| || | |||||||||||| || |||||||| || || || | Sbjct 6093 AGTCGGAATTG---TCTTTGGAAAGATCCACTTCTTCTACAGTCCAAAAAGAAGCTTCGG 6149 Query 36687 CCT 36689 ||| Sbjct 6150 CCT 6152 >seq14616 Length=5376 Score = 109 bits (120), Expect = 7e-19 Identities = 89/108 (82%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 31215 AATACCTAATTCCTTGACCTGAGTTAATGATCTCCAATCCATATTAGCGCTTCCTAAATA 31274 |||||| ||||| || ||||| ||||| |||||||| |||||||| || || || ||||| Sbjct 1340 AATACCCAATTCTTTAACCTGTGTTAAAGATCTCCAGTCCATATTGGCACTGCCCAAATA 1399 Query 31275 AATATGTGTATTATCAGATATCCAAAATTTTGTATGAAGAACTCCTCC 31322 ||| ||| | ||||| || ||||||||||||||||| | ||| || || Sbjct 1400 AATGTGTTTGTTATCGGAAATCCAAAATTTTGTATGTAAAACACCACC 1447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657415284243000