Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq9860 567 1e-156 seq74052 280 2e-70 seq14616 109 8e-19 >seq9860 Length=13996 Score = 567 bits (628), Expect = 1e-156 Identities = 1407/2116 (66%), Gaps = 22/2116 (1%) Strand=Plus/Plus Query 78865 ATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATA 78924 ||||| || || | || || ||||||| |||| | ||||| | ||| ||||||| Sbjct 9144 ATGAAAGCGCCACGATCGGCGGCCATTTGTATGGTGGTCTTAACGGAAATCTCCCAAACT 9203 Query 78925 GTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGT-TTGTATTC--TGAATGGATCCACC 78980 || || || | || | || ||| || |||| | || ||| || ||||| || | Sbjct 9204 GTCTTGTATAGATCACGTA-TATGTTTGGGAATTTCTTCTATGGCTTGTATGGAGCCGCG 9262 Query 78981 ATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCT 79040 || | ||||| |||| || || || |||| |||||| | ||||||||| || | Sbjct 9263 ATTGGAAATAATTTTATTTTTCATTTCATCATCCCATAAATCAAGTTCGGTTAAATCTTT 9322 Query 79041 AAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATT 79100 ||| | ||| |||| || || | |||||||| ||||| || | | |||||||||||| Sbjct 9323 AAGCAAATGATGATTGACAACATTGAATTCTCCCGACAAAACACGTCTAGTGTAAATATT 9382 Query 79101 ACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGG 79160 ||| || ||||| | |||||||| || || | |||||| || || || || || || Sbjct 9383 GGAGGTGTACGGTTCAAAGGATTCATTGTTGCCTAGAATTTGTGCGGTCGAAGCTGTGGG 9442 Query 79161 CATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGATTTTATCTTTTAGAGA 79220 ||| || || | | ||| ||| | | ||| | | ||||||| || || | Sbjct 9443 CATGGGGGCTAATAGCAAAGAATTGCGTACACCATGTTGCTTGATTTTCTCCTTCAACTC 9502 Query 79221 TTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAATACCGTT 79280 | ||| | ||| | || | || |||||| | ||| |||||||| ||||| || Sbjct 9503 TGACCAGTTCCACAAGTCTGTGGGTGTTTTATTCCACATATCGTATTGTAGTATACCCTT 9562 Query 79281 ACTAGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACT 79340 ||| | | || | || |||||||| | || || |||||||| ||||||||||| Sbjct 9563 ACTTACTGGACAGCCGGGATAAGTTTCATATGTGCCATCTTTTTCGGCCAATTCACAACT 9622 Query 79341 CGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTC 79400 || || ||||| || |||||||| ||||||||||||| | ||| | || | Sbjct 9623 AGCTTCCAATGCGCCATAATAAATAGTTTCGAAAATCTGTTGATTTAACAAAAACGCCTT 9682 Query 79401 TAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAAT 79460 | || ||| | || ||| | | ||| || | || || || || |||||||| || Sbjct 9683 TTCACTCTCATAGGGGTAACGCATTAAAATCAAAGTATCGGCAAAACCCTGAACACCTAT 9742 Query 79461 ACCGATAGGTCTATGTCTCTTATTAGAAATTTC--AGCTTCTGGAATAGGATAATAATTA 79518 || ||||| | ||| | | |||| || |||| ||| || || | |||||||| ||| Sbjct 9743 GCCAATAGGACGATGACGCATATTGGA--TTTCCTAGCCTCAGGCAAGGGATAATAGTTA 9800 Query 79519 ATATCTATAATTTTATTGAGATTCCTGACTATTACTTTGACCACATCCTTTAGTTTGAGA 79578 || || || ||||| ||||||||| || || ||||| |||| || | ||| | Sbjct 9801 ATGTCGATGATTTTGTTGAGATTCTTGGTAATGACTTTAGTGACATTTTTCAATTTTTTA 9860 Query 79579 AAATCAAA--TCGTCCATC-TATTACAAACATGTTCAACGCGACAGATGCCAGATTACAA 79635 |||||||| || | | | | |||||||| || | || | || |||| ||||||| Sbjct 9861 AAATCAAAGGTCTTTTCTGGTGTGACAAACATATTAAGGGCTATGGAGGCCAAATTACAA 9920 Query 79636 ACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTA 79695 ||||||| ||||| || | | ||||| || || || ||||| | ||| || |||||| Sbjct 9921 ACGGCTATCTCATCAGGGGCAGAATATTCTACAATCTCTGTGCACAAGTTGCTGCACTTA 9980 Query 79696 ATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAAC 79755 ||||| || | |||||| || ||||| || ||| || ||||| ||||| | || | Sbjct 9981 ATGGTGCCAATATTTTGCTGGTTACTTTTGCGGTTGCAGGCATCTTTATACAACATATAG 10040 Query 79756 GGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATT 79815 |||||||| ||||| | || | ||| || || || ||| | | ||||||| | Sbjct 10041 GGAGTACCGGTTTCTACTTGGGCTTCAATTATAGCAAACCAAAGAGCCTGAGCCTTGACA 10100 Query 79816 ATAGACTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCC 79875 | ||| | |||| |||| || | ||||| ||| |||||| || || ||| Sbjct 10101 GTGCGATTGGCCTTACCTTCTTTTTCATACTTGGTATACAATTCTTCGAATTCCTCACCC 10160 Query 79876 CAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCC 79935 |||||||| | | || ||||||| || ||||||||| | ||||| || |||| || Sbjct 10161 CAAACATCCTGCAGACCGGGACATTTGTGAGGACACATTAGGGACCAGTCACCATTTTCT 10220 Query 79936 TTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCT 79994 | || ||||||||||| | || || ||||| | ||| ||| || |||||||||| ||| Sbjct 10221 TCCACACGTTTCATAAACAAGTCGGGTATCCACAAAGC-ATAGAAAAGATCTCTGGCTCT 10279 Query 79995 ATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 80054 ||||| || || || || || || || | ||| | || | | |||||| |||||||| Sbjct 10280 GTGCTCTTCCTTGCCGGTGTTTTTCTTTAAATCCAAAAATTCAAAAATATCTGAATGCCA 10339 Query 80055 CGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCT 80114 || ||||| || || || | | || || |||||| || |||||||| | || | Sbjct 10340 AGGCTCCAAATAAATAGCAAAGGCACCAGGGCGTTTGCCACCACCCTGATCAACATAACG 10399 Query 80115 AGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCC 80174 || || ||| | || || | |||||| | | |||||| || || || || || || Sbjct 10400 GGCCACATTGTTAAACACCCTAAGCATTGGTACCAGACCATTTGAGGTGCCGTTAGTGCC 10459 Query 80175 GGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCC 80232 | || | | || | || | ||| | | | ||| || || || || || || Sbjct 10460 GTCAATGGAAGTGCCCTTAGCTCTAATGCAGTGCACATT--TATGCCAATACCACCCGCT 10517 Query 80233 ATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCA 80292 ||| || || | || ||| ||| | | | | || ||||| || ||| | Sbjct 10518 GATTTGGAAATCATGGCACATTGTTCCACTGACTTGAAAATACCCTCAATAGAATCGGCC 10577 Query 80293 ATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAG 80352 | |||| | | | || || |||| || | | | | || | || ||| || Sbjct 10578 ACCATGGTCAACAAGAAGCATGACGACAACTGCGGTCTATTGGTAGCGGCCGCAAACAAT 10637 Query 80353 GTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGAT 80412 ||||| ||||| || ||||| | ||||||| | ||| || || |||||||| || Sbjct 10638 GTAGGTGAAGCATGAGTAAAATAACGCTCAGACAACAAATTATAAGTTTCAATAGCCGAA 10697 Query 80413 TCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCA 80472 || ||||| | ||| || |||| || || | ||||||||| ||||| ||||| ||| Sbjct 10698 TCAATATCATCTCCATGTATACCTATAGCTACTCTCATTAACATATGCTGTGGTCTCTCA 10757 Query 80473 ACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAG 80532 || ||||| ||| ||||||| ||| |||||| | |||| || || || || || ||| Sbjct 10758 ACAATCTTACCATTCATTTTCAGCAAATAAGATCTCTCCAGTGTCTTGAAGCCGAAGTAG 10817 Query 80533 TTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTA 80592 ||||| |||||| || || |||||||| ||| || | || || ||| | Sbjct 10818 TTGTAGCCAAAGTCACGATCATAAATAATTGACGAATTTAAACGTTCTGCATTTTTCTGC 10877 Query 80593 ACTACATCCATGGTGATACT-TGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAAC 80651 ||||||| | ||| || | ||||| | || || || |||| | | |||||| Sbjct 10878 ACTACAT-TGTAGTGGTATTCGGAAATCAAAGGCGATGGTCTCCCCGTCTCTTTATTAAC 10936 Query 80652 ATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATT 80711 | | | | | ||| || || || |||| |||||| ||||| ||||| | ||| Sbjct 10937 AAAATGATACAGATCACTTATAACCTCTGAGAATACTTTTTTCGTTTCTTTGTGCAAATT 10996 Query 80712 TGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGC 80771 ||||| || || | || || || ||||||||||| ||| | ||||| | || || Sbjct 10997 GGATACTGCAATACGAGCTGCCAATATGGCATAATCGCCATGATTAGTAGTTAATGTAGC 11056 Query 80772 TGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTG 80831 || | || || |||| | | || | |||| || || || ||| || | || | Sbjct 11057 AGCAGTCTCTGCCGCCAAATTATCTAGTTCTTGTGTAGTAACACCACAGTAAAGGCCATT 11116 Query 80832 GATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAA 80891 || ||||||| | || | ||||| | ||| | || |||||||| |||| Sbjct 11117 AATTACCTTCAGTGTAATGGCCACTGGATCAACGAAATCCATATTCAAGCCATAGCATAG 11176 Query 80892 TTTTCTAATACGAGACGTGATTTTATCAAACATG-ACATTTTCCTTGTATCCATTTCGTT 80950 ||| ||| || || || |||||||| || ||| || | ||||||| ||||| ||||| Sbjct 11177 CTTTTGAATTCGTGATGTTATTTTATCGAA-ATGAACCTCTTCCTTGCGTCCATCTCGTT 11235 Query 80951 TAATGACAAACATTTT 80966 ||| ||||||| ||| Sbjct 11236 TAAGAACAAACAATTT 11251 >seq74052 Length=11856 Score = 280 bits (310), Expect = 2e-70 Identities = 498/723 (69%), Gaps = 9/723 (1%) Strand=Plus/Plus Query 49775 CCAATTCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAAT 49834 ||||||| | ||| | ||| || ||||||||||| ||| | ||||| || ||||| Sbjct 5433 CCAATTCCACTAGCAAACGATCGGCCACAAATTCTATGTATTCTGACATCAATTTACAAT 5492 Query 49835 TCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCG 49894 |||| ||||| | || || || | ||| | ||||| |||||||||||||| |||| Sbjct 5493 TCATGCCTATCAAATTGACGGGCAAAGCATCTGTAAGGAATTCTTGTTCAATTTTCACCG 5552 Query 49895 CATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACA 49954 | || || ||||| ||| | || ||| || | || | ||||||||||||| Sbjct 5553 CTTCGGTGATAATTTCAATAATTCTCTCCCGACTGGGACGTTGTACCAAATGTTTAAACA 5612 Query 49955 TCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACG 50014 | || || ||||| || || | |||||| || | ||| | ||| ||||| || | Sbjct 5613 TTAATACCGCAAAATCACAATGTAAACCCTCATCACGTGAAATCAATTCATTGGAGAATG 5672 Query 50015 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAA 50074 | || || ||||| || ||||| || || ||||| || ||||| ||||| ||| | Sbjct 5673 TAAGACCAGGCATAAGACCACGTTTCTTTAGCCAGAAGATGGAGGCAAAACTGCCACTGA 5732 Query 50075 AGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGC-GCTGTCA 50133 |||| || || || || || ||||| |||| || | || ||| || | || | | || Sbjct 5733 AGAAAATACCCTCCACAGCAGCAAAAGCAATAATACGTTCACCAAAATTAGCCGATTTCG 5792 Query 50134 TGTA--TCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGG 50191 | | |||| ||||||||| ||||| || ||| ||||| ||||| |||| Sbjct 5793 AGGAAATCCAAGCCATAGCCCAATCAGCCTTACGCTTAACAGCCGGCATAGTTTCAATGG 5852 Query 50192 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTAT 50251 ||||||||||||| | | | | ||| |||| |||| |||| || | || ||||| Sbjct 5853 CATTAAAGAGATAATCACGCTGCTCGCGATCCTTAATATAACTATCAATTAGAATACTAT 5912 Query 50252 ACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGG 50311 ||||||| || || | ||||| ||||| || || || || |||||||| | ||||| | Sbjct 5913 ACATTTCAGAGTGTACATTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGTGCCTCTG 5972 Query 50312 TAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGG 50371 ||| || |||||| | || |||||| | | ||||||||| || || || || | Sbjct 5973 TAACTTGTACTTCTTGGGAGAAGCGTTCAACAAGATTTTCATTGACAATGCCATCGGAAG 6032 Query 50372 CTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCC 50431 | ||||| || || | |||||| || ||||| ||| ||| || ||| | | || Sbjct 6033 CAGCAAAGAAAGCTAGAACATGTGAAATGAAATGACGTTCATTGTCGGTGAGTCTTTCCC 6092 Query 50432 AATC---ATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTG 50488 | || |||| ||||| || | ||| |||||||| || |||||||| || || || | Sbjct 6093 AGTCGGAATTG---TCTTTGGAAAGATCCACTTCTTCTACAGTCCAAAAAGAAGCTTCGG 6149 Query 50489 CCT 50491 ||| Sbjct 6150 CCT 6152 >seq14616 Length=5376 Score = 109 bits (120), Expect = 8e-19 Identities = 89/108 (82%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 44990 AATACCCAATTCCTTGACCTGAGTTAGTGATCTCCAATCCATGTTAGCGCTTCCTAAATA 45049 |||||||||||| || ||||| |||| |||||||| ||||| || || || || ||||| Sbjct 1340 AATACCCAATTCTTTAACCTGTGTTAAAGATCTCCAGTCCATATTGGCACTGCCCAAATA 1399 Query 45050 AATATGTGTATTATCGGATATCCAAAATTTTGTATGAAGAACTCCTCC 45097 ||| ||| | |||||||| ||||||||||||||||| | ||| || || Sbjct 1400 AATGTGTTTGTTATCGGAAATCCAAAATTTTGTATGTAAAACACCACC 1447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 717442117503000