Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq9860 508 8e-139 seq74052 260 2e-64 seq14616 105 9e-18 >seq9860 Length=13996 Score = 508 bits (562), Expect = 8e-139 Identities = 1386/2115 (66%), Gaps = 20/2115 (1%) Strand=Plus/Plus Query 70948 ATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATA 71007 ||||| || || | || || ||||||| |||| | ||||| | ||| ||||||| Sbjct 9144 ATGAAAGCGCCACGATCGGCGGCCATTTGTATGGTGGTCTTAACGGAAATCTCCCAAACT 9203 Query 71008 GTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGT-TTGTATTC--TGAATGGATCCACC 71063 || || || | || | || ||| || |||| | || ||| || ||||| || | Sbjct 9204 GTCTTGTATAGATCACGTA-TATGTTTGGGAATTTCTTCTATGGCTTGTATGGAGCCGCG 9262 Query 71064 ATCTGCAATAATCCTATTTTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCT 71123 || | |||||| ||||||| || || |||| |||||| | ||||||||| || | Sbjct 9263 ATTGGAAATAATTTTATTTTTCATTTCATCATCCCATAAATCAAGTTCGGTTAAATCTTT 9322 Query 71124 AAGGAGATGAGGATTAACTACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATT 71183 ||| | |||| |||| || || | |||||||| ||||| || | | |||||||||||| Sbjct 9323 AAGCAAATGATGATTGACAACATTGAATTCTCCCGACAAAACACGTCTAGTGTAAATATT 9382 Query 71184 ACTGGTATACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGG 71243 ||| |||||||| | || ||||| || || | |||||| || || || || || || Sbjct 9383 GGAGGTGTACGGTTCAAAGGATTCATTGTTGCCTAGAATTTGTGCGGTCGAAGCTGTGGG 9442 Query 71244 CATAGGTGCCACCAATAGACTATTTCTAAGACCATGTGATCGGATTTTATCTTTTAGAGA 71303 ||| || || | | | | ||| | | ||||||| |||||| || || | Sbjct 9443 CATGGGGGCTAATAGCAAAGAATTGCGTACACCATGTTGCTTGATTTTCTCCTTCAACTC 9502 Query 71304 TTCCCAATTCCAAAGATCCGATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTT 71363 | ||| ||||| | || | ||| || || || Sbjct 9503 TGACCAGTTCCACAAGTCTGTGGGTGTTTTATTCCACATATCGTATTGTAGTATACCCTT 9562 Query 71364 ACTAGCGTATGATCCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACT 71423 ||| | | || | ||| || || |||| || ||||||||||| | ||||||||| Sbjct 9563 ACTTACTGGACAGCCGGGATAAGTTTCATATGTGCCATCTTTTTCGGCCAATTCACAACT 9622 Query 71424 CGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTC 71483 || || ||||| ||||||||||| ||||||||||||| | ||| | || | Sbjct 9623 AGCTTCCAATGCGCCATAATAAATAGTTTCGAAAATCTGTTGATTTAACAAAAACGCCTT 9682 Query 71484 CGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAAT 71543 || ||| | || ||| | | ||| || | || || || || ||||| || || Sbjct 9683 TTCACTCTCATAGGGGTAACGCATTAAAATCAAAGTATCGGCAAAACCCTGAACACCTAT 9742 Query 71544 ACCGATAGGTCTGTGTCTCTTATTAGAAATTTC--AGCTTCTGGAATAGGATAATAATTA 71601 || ||||| | || | | |||| || |||| ||| || || | |||||||| ||| Sbjct 9743 GCCAATAGGACGATGACGCATATTGGA--TTTCCTAGCCTCAGGCAAGGGATAATAGTTA 9800 Query 71602 ATATCTATAATTTTATTGAGATTTCTGACTATTACTTTGACCACATCCTTTAGTTTGAGA 71661 || || || ||||| |||||||| || || ||||| |||| || | ||| | Sbjct 9801 ATGTCGATGATTTTGTTGAGATTCTTGGTAATGACTTTAGTGACATTTTTCAATTTTTTA 9860 Query 71662 AAATCAAATCTCCCATCTATT---ACAAACACGTTCAAGGCAACAGATGCCAGATTACAA 71718 |||||||| || ||| | ||||||| || | ||| | || |||| ||||||| Sbjct 9861 AAATCAAAGGTCTTTTCTGGTGTGACAAACATATTAAGGGCTATGGAGGCCAAATTACAA 9920 Query 71719 ACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTG 71778 ||||||| ||||| || | | ||||| || ||| || ||||| | || || ||||| Sbjct 9921 ACGGCTATCTCATCAGGGGCAGAATATTCTACAATCTCTGTGCACAAGTTGCTGCACTTA 9980 Query 71779 ATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAAC 71838 ||||| || | |||||| || ||||| || ||| || ||||| ||||| | ||| | Sbjct 9981 ATGGTGCCAATATTTTGCTGGTTACTTTTGCGGTTGCAGGCATCTTTATACAACATATAG 10040 Query 71839 GGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATT 71898 |||||||| ||||| | || | ||| || || || ||| | | ||||||| | Sbjct 10041 GGAGTACCGGTTTCTACTTGGGCTTCAATTATAGCAAACCAAAGAGCCTGAGCCTTGACA 10100 Query 71899 ATATTCTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCC 71958 | ||| | |||| |||| || | ||||| ||| |||||| || || ||| Sbjct 10101 GTGCGATTGGCCTTACCTTCTTTTTCATACTTGGTATACAATTCTTCGAATTCCTCACCC 10160 Query 71959 CAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCA 72018 ||| ||| | | || ||||||| | |||||||| | ||||| || |||| || Sbjct 10161 CAAACATCCTGCAGACCGGGACATTTGTGAGGACACATTAGGGACCAGTCACCATTTTCT 10220 Query 72019 TTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCT 72077 | || ||||||||||| | || || ||||| | ||| ||| || |||||||||| ||| Sbjct 10221 TCCACACGTTTCATAAACAAGTCGGGTATCCACAAAGC-ATAGAAAAGATCTCTGGCTCT 10279 Query 72078 ATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 72137 ||||| || || || || || || || | ||| | || | | |||||| |||||||| Sbjct 10280 GTGCTCTTCCTTGCCGGTGTTTTTCTTTAAATCCAAAAATTCAAAAATATCTGAATGCCA 10339 Query 72138 CGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCT 72197 || ||||| || || || | | || || |||||| || |||||||| | || | Sbjct 10340 AGGCTCCAAATAAATAGCAAAGGCACCAGGGCGTTTGCCACCACCCTGATCAACATAACG 10399 Query 72198 AGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCC 72257 || || ||| | || || | |||||| | | |||||| || | || || || || Sbjct 10400 GGCCACATTGTTAAACACCCTAAGCATTGGTACCAGACCATTTGAGGTGCCGTTAGTGCC 10459 Query 72258 GGAGATATAGCTTCCACTGGCACGAAT--ATTGCTAATTGATAGACCTATTCCCCCTGCC 72315 | || | | || | || | ||| | ||| ||| || || || || || || Sbjct 10460 GTCAATGGAAGTGCCCTTAGCTCTAATGCAGTGCACATT--TATGCCAATACCACCCGCT 10517 Query 72316 ATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCC 72375 ||| || || | || ||| ||| | | | | || ||||| ||| ||| || Sbjct 10518 GATTTGGAAATCATGGCACATTGTTCCACTGACTTGAAAATACCCTCAATAGAATCGGCC 10577 Query 72376 ATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAG 72435 | |||| | | | || || |||| || | | | | || | || ||| || Sbjct 10578 ACCATGGTCAACAAGAAGCATGACGACAACTGCGGTCTATTGGTAGCGGCCGCAAACAAT 10637 Query 72436 GTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGAT 72495 ||||| ||||| || ||||| | ||||||| | ||| || || |||||||| || Sbjct 10638 GTAGGTGAAGCATGAGTAAAATAACGCTCAGACAACAAATTATAAGTTTCAATAGCCGAA 10697 Query 72496 TCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCA 72555 || ||||| | |||||| |||| || || | ||||||||||||||| ||||| ||| Sbjct 10698 TCAATATCATCTCCATGTATACCTATAGCTACTCTCATTAACATATGCTGTGGTCTCTCA 10757 Query 72556 ACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAG 72615 || ||||| ||| ||||||| ||| || ||| | |||| || || || || || ||| Sbjct 10758 ACAATCTTACCATTCATTTTCAGCAAATAAGATCTCTCCAGTGTCTTGAAGCCGAAGTAG 10817 Query 72616 TTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTA 72675 ||||| |||||| || || |||||||| |||||| | || || ||| | Sbjct 10818 TTGTAGCCAAAGTCACGATCATAAATAATTGACGAATTTAAACGTTCTGCATTTTTCTGC 10877 Query 72676 ACTATATCCATGGTGATACT-TGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAAC 72734 |||| || | ||| || | ||||| | || || || |||| | | |||||| Sbjct 10878 ACTACAT-TGTAGTGGTATTCGGAAATCAAAGGCGATGGTCTCCCCGTCTCTTTATTAAC 10936 Query 72735 ATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATT 72794 | | | | | ||| || || || |||| |||||| ||||| ||||| | ||| Sbjct 10937 AAAATGATACAGATCACTTATAACCTCTGAGAATACTTTTTTCGTTTCTTTGTGCAAATT 10996 Query 72795 TGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGC 72854 ||||| || || | || || | ||||||||||| ||| | ||||| | || || Sbjct 10997 GGATACTGCAATACGAGCTGCCAATATGGCATAATCGCCATGATTAGTAGTTAATGTAGC 11056 Query 72855 TGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTG 72914 || | ||||| |||| | | || | |||| || || || ||| || | || | Sbjct 11057 AGCAGTCTCTGCCGCCAAATTATCTAGTTCTTGTGTAGTAACACCACAGTAAAGGCCATT 11116 Query 72915 GATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAA 72974 || ||||||| | || | ||||| | ||| | || |||||||| |||| Sbjct 11117 AATTACCTTCAGTGTAATGGCCACTGGATCAACGAAATCCATATTCAAGCCATAGCATAG 11176 Query 72975 TTTTCTAATACGAGACGTGATTTTATCAAACATAACATTTTCCCGGCATCCATTTCGTTT 73034 ||| ||| || || || |||||||| || ||| | |||| || ||||| |||||| Sbjct 11177 CTTTTGAATTCGTGATGTTATTTTATCGAAATGAACCTCTTCCTTGCGTCCATCTCGTTT 11236 Query 73035 AACGACAAACATTTT 73049 || ||||||| ||| Sbjct 11237 AAGAACAAACAATTT 11251 >seq74052 Length=11856 Score = 260 bits (288), Expect = 2e-64 Identities = 496/725 (68%), Gaps = 13/725 (2%) Strand=Plus/Plus Query 41880 CCAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAAT 41939 ||||||| | ||| | ||| || | |||||||| ||| | ||||| || ||||| Sbjct 5433 CCAATTCCACTAGCAAACGATCGGCCACAAATTCTATGTATTCTGACATCAATTTACAAT 5492 Query 41940 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 41999 |||| ||||| | || || || | ||| | ||||| |||||||||||||| |||| Sbjct 5493 TCATGCCTATCAAATTGACGGGCAAAGCATCTGTAAGGAATTCTTGTTCAATTTTCACCG 5552 Query 42000 CGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACA 42059 | || || ||||| | | | | || ||| || | | | ||||||||||||| Sbjct 5553 CTTCGGTGATAATTTCAATAATTCTCTCCCGACTGGGACGTTGTACCAAATGTTTAAACA 5612 Query 42060 TCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACG 42119 | || || ||||| || || | ||||||||| | ||| ||||| ||||| || | Sbjct 5613 TTAATACCGCAAAATCACAATGTAAACCCTCATCACGTGAAATCAATTCATTGGAGAATG 5672 Query 42120 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAA 42179 | || || ||||| || ||||| || || ||||| || || || ||||| ||| | Sbjct 5673 TAAGACCAGGCATAAGACCACGTTTCTTTAGCCAGAAGATGGAGGCAAAACTGCCACTGA 5732 Query 42180 AGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCAC-TGTCA 42238 |||| || || || || || ||||| ||||||| | || ||| || || | || Sbjct 5733 AGAAAATACCCTCCACAGCAGCAAAAGCAATAATACGTTCACCAAAATTAGCCGATTTCG 5792 Query 42239 TGTA--TCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGG 42296 | | |||| ||||||||| ||||| || ||| ||||| ||||| |||| Sbjct 5793 AGGAAATCCAAGCCATAGCCCAATCAGCCTTACGCTTAACAGCCGGCATAGTTTCAATGG 5852 Query 42297 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTAT 42356 ||||||||||||| | | | | ||| |||| ||| |||| || | || ||||| Sbjct 5853 CATTAAAGAGATAATCACGCTGCTCGCGATCCTTAATATAACTATCAATTAGAATACTAT 5912 Query 42357 ACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGG 42416 ||||||| || || | ||||| ||||| || || || || |||||||| | ||||| | Sbjct 5913 ACATTTCAGAGTGTACATTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGTGCCTCTG 5972 Query 42417 TAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGG 42476 |||| ||||||||| | || |||||| | | |||||| || || || || || | Sbjct 5973 TAACTTGTACTTCTTGGGAGAAGCGTTCAACAAGATTTTCATTGACAATGCCATCGGAAG 6032 Query 42477 CTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGT--CCGGTGTTAATTTATT 42534 | ||||| || || | |||||| || |||| ||| | ||||| | | | | Sbjct 6033 CAGCAAAGAAAGCTAGAACATGTGAAATGAAATGACGTTCATTGTCGGTG--AGTCTTTC 6090 Query 42535 CCAATC---ATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTC 42591 ||| || |||| ||||| || | ||| ||||||||||| |||||||| || ||||| Sbjct 6091 CCAGTCGGAATTG---TCTTTGGAAAGATCCACTTCTTCTACAGTCCAAAAAGAAGCTTC 6147 Query 42592 TGCCT 42596 |||| Sbjct 6148 GGCCT 6152 >seq14616 Length=5376 Score = 105 bits (116), Expect = 9e-18 Identities = 88/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 36473 AATACCCAATTCCTTGACCTGAGTTAGTGATCTCCAATCCATGTTAGCGCTTCCTAAATA 36532 |||||||||||| || ||||| |||| |||||||| ||||| || || || || ||||| Sbjct 1340 AATACCCAATTCTTTAACCTGTGTTAAAGATCTCCAGTCCATATTGGCACTGCCCAAATA 1399 Query 36533 AATATGTGTATTATCAGATATCCAAAATTTTGTATGAAGAACTCCTCC 36580 ||| ||| | ||||| || ||||||||||||||||| | ||| || || Sbjct 1400 AATGTGTTTGTTATCGGAAATCCAAAATTTTGTATGTAAAACACCACC 1447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670366760727000