Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq82145 120 2e-22 seq10127 93.3 3e-14 seq10922 82.4 5e-11 >seq82145 Length=1636 Score = 120 bits (132), Expect = 2e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 33152 AACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGT 33211 || || || |||||||||||||| || |||||||||||||| ||||||||||| || | Sbjct 1388 AAACGTAATACCAAATGCAATGTAGATTCTTTTTGTATATTATAATCAGACAATGTGCGC 1329 Query 33212 TGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCT 33271 ||| |||||||| || ||| ||| || |||||||| || || | || || ||||| Sbjct 1328 CCGTCTTCCAATTGTTTGCCAGCAAAAATCAAACGTTGTTGATCTGGTGGGATTCCTTCC 1269 Query 33272 TTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331 || || ||| ||| || ||| ||| || ||| || | ||| |||| ||| Sbjct 1268 TTGTCTTGAATTTTAGCTTTAACATTTTCAATAGTATCGGAAGGCTCAACCTCCAAAGTG 1209 Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370 || ||||| || || | || || || || ||||||||| Sbjct 1208 ATGGTTTTGCCAGTCAATGTCTTAACAAAGATTTGCATG 1170 Score = 91.5 bits (100), Expect = 9e-14 Identities = 154/222 (69%), Gaps = 6/222 (3%) Strand=Plus/Minus Query 33152 AACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGT 33211 || ||||| ||||| || | || || |||||||| || ||||| || || ||| || | Sbjct 1616 AAACGCAATACCAAGTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCGGATAAAGTGCGG 1557 Query 33212 TGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCT 33271 || ||||| ||||| ||| || || ||||| || || || | ||| || |||||| Sbjct 1556 CCATCTTCCAACTGCTTACCAGCGAAAATCAAACGCTGTTGATCTGGGGGAATACCTTCT 1497 Query 33272 TTTTC---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGA 33328 || || | | | || ||| || ||| || || || |||| ||| || | Sbjct 1496 TTGTCTTGGATTTTAGC---TTTAACATTTTCTATAGTATCCGAAGGTTCAACCTCTAAT 1440 Query 33329 GTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370 || || ||||| ||||| | ||||| ||||||||||||||| Sbjct 1439 GTAATTGTTTTACCCGTTAATGTTTTAACGAAAATTTGCATG 1398 >seq10127 Length=8452 Score = 93.3 bits (102), Expect = 3e-14 Identities = 149/213 (70%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 33160 CACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATC 33219 ||||||||| | || ||||| ||||| || ||||| ||||||||| || | || || Sbjct 6923 CACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTGCGACCATCTTC 6982 Query 33220 CAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC--- 33276 |||||| || || ||| || ||||||||||| || | || || ||||| || || Sbjct 6983 CAATTGTTTGCCGGCAAAGATCAAACGTTGCTGATCTGGAGGAATACCTTCCTTATCCTG 7042 Query 33277 GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGT 33336 | | | ||| || || ||| ||| ||||| || | || |||| || || || Sbjct 7043 GATCTTAGCC---TTGACGTTTTCAATAGTGTCCGAAGGCTCGACTTCCAAGGTGATGGT 7099 Query 33337 TTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 ||| || || | || |||||||| |||||||| Sbjct 7100 TTTACCGGTCAAGGTCTTTACGAAGATTTGCAT 7132 >seq10922 Length=8781 Score = 82.4 bits (90), Expect = 5e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214 ||||| || || |||| | || || |||| ||||||||||| || | | | Sbjct 3019 CGCAATACTAAGTGCAGAATGGATTCCTTTTCAATATTGTAATCCGAGAGGGTACGACCA 3078 Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274 || |||||||| |||||| || || |||||||| || || | || || |||||||| Sbjct 3079 TCTTCCAATTGTTTTCCAGCGAAAATCAAACGTTGTTGATCTGGTGGAATTCCTTCTTTG 3138 Query 33275 TCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATC 33334 || |||| ||| || ||| ||| ||||| || | || || ||||| || Sbjct 3139 TCCTGAATCTTGGCTTTGACATTTTCAATAGTGTCCGACGGCTCGACCTCAAGAGTAATG 3198 Query 33335 GTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || ||||| || ||||| || ||||| ||||| Sbjct 3199 GTCTTACCCGTTAGGGTTTTGACAAAAATCTGCAT 3233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318419879233350