Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq82145 158 3e-33 seq10922 158 3e-33 >seq82145 Length=1636 Score = 158 bits (174), Expect = 3e-33 Identities = 161/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 104350 TACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTC 104409 ||| | ||| |||||||||||||| || |||||||| ||||| | || | |||||||| Sbjct 1380 TACCAAATGCAATGTAGATTCTTTTTGTATATTATAATCAGACAATGTGCGCCCGTCTTC 1321 Query 104410 TAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTG 104469 | |||||| ||||||||||| | | |||||||| || || |||||||| || || || Sbjct 1320 CAATTGTTTGCCAGCAAAAATCAAACGTTGTTGATCTGGTGGGATTCCTTCCTTGTCTTG 1261 Query 104470 AATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTT 104529 ||| || ||||| |||||||| | |||||| ||| || ||||| | || || || || Sbjct 1260 AATTTTAGCTTTAACATTTTCAATAGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTTT 1201 Query 104530 ACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| | ||| || ||||| || ||||| Sbjct 1200 GCCAGTCAATGTCTTAACAAAGATTTGCAT 1171 >seq10922 Length=8781 Score = 158 bits (174), Expect = 3e-33 Identities = 152/195 (78%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 104366 GATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCA 104425 ||||| || | |||||| || || || || || | ||| ||||| | |||||||||||| Sbjct 3040 GATTCCTTTTCAATATTGTAATCCGAGAGGGTACGACCATCTTCCAATTGTTTTCCAGCG 3099 Query 104426 AAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACA 104485 ||||| | | |||||||| || || ||||||||||| ||||||||||| ||||| ||| Sbjct 3100 AAAATCAAACGTTGTTGATCTGGTGGAATTCCTTCTTTGTCCTGAATCTTGGCTTTGACA 3159 Query 104486 TTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTT 104545 ||||| | || || || || ||||| || ||||| |||||||| || || ||||| Sbjct 3160 TTTTCAATAGTGTCCGACGGCTCGACCTCAAGAGTAATGGTCTTACCCGTTAGGGTTTTG 3219 Query 104546 ACAAATATCTGCATT 104560 ||||| ||||||||| Sbjct 3220 ACAAAAATCTGCATT 3234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1150040082714100