Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq8577 116 2e-21 >seq8577 Length=4581 Score = 116 bits (128), Expect = 2e-21 Identities = 191/273 (70%), Gaps = 2/273 (1%) Strand=Plus/Plus Query 3873 AAGGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTTGAGGGTCAAGAAAATATGC 3932 |||| || ||||| | ||||| |||||||| || || ||||| |||||||||||||| | Sbjct 2182 AAGGCGTTCATTTCGTTATGGCAGACGGTGGATTTTCCGTTGAAGGTCAAGAAAATATTC 2241 Query 3933 AAGAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTAATTGCATTGATGATCATAC 3992 |||| || ||||| ||| || | ||||| ||||||||| | | || | | || || Sbjct 2242 AAGAGATATTATCAAAACAGCTTTATTTATGTCAATGTCTCACAGCTCTTAAAATTTTAA 2301 Query 3993 GAATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTTACACCTTTTAGTGCTGGTT 4052 | ||| || |||| ||| | |||||||| ||||| || ||||||| ||| Sbjct 2302 GGTGCAATGGAAGTTTTGTTTGCAAGCTATTCGATATTTTTACGCCGTTTAGTGTAGGTC 2361 Query 4053 TAGTGTATTTGATGTATAGATCTTTTAATCGTATTTGTATTTTCAAACCACAT-TCATCG 4111 | || ||||| |||||| | ||| | || || | |||||| || || | Sbjct 2362 TGGTATATTTAATGTATCAGTGTTTCGAAGAAATAGCAATAATAAAACCAAATAGCAGC- 2420 Query 4112 CGACCGGCCAATTCTGAAAGATATTTGGTGTGT 4144 || || ||||| || ||||||||||| || ||| Sbjct 2421 CGTCCCGCCAACTCGGAAAGATATTTAGTATGT 2453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276243261488725