Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq18748 107 3e-19 >seq18748 Length=5864 Score = 107 bits (118), Expect = 3e-19 Identities = 98/124 (79%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||| | ||||| ||||||||||| || || |||||||| || || Sbjct 291 GCCAAGCGTCATCGTAAGGTACTTCGTGATAACATCCAGGGTATTACCAAGCCGGCCATA 350 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||| || ||||||||||| || |||||| | || || || |||||||||| | | Sbjct 351 CGTCGTCTAGCCCGTCGTGGTGGTGTAAAGCGTATTTCGGGTTTAATCTATGAAGAAACT 410 Query 16553 CGTG 16556 |||| Sbjct 411 CGTG 414 Score = 100 bits (110), Expect = 4e-17 Identities = 95/119 (80%), Gaps = 2/119 (2%) Strand=Plus/Plus Query 16582 CGTTATCCATGATGCT-TTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCA 16640 ||| || | ||||||| || || || ||||| || ||||||||||| ||||| ||| ||| Sbjct 532 CGTCATTCGTGATGCTGTTACA-TACACCGAACATGCTAAACGTAAAACTGTTACCGCCA 590 Query 16641 TGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||||| | |||||||| ||||| |||||||| |||| | || |||||||| ||||| Sbjct 591 TGGATGTGGTCTATGCTTTGAAGCGTCAAGGTCGTACTTTGTACGGTTTTGGTGGTTAA 649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78991015182975