Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq9860 264 3e-65 >seq9860 Length=13996 Score = 264 bits (292), Expect = 3e-65 Identities = 695/1054 (66%), Gaps = 19/1054 (2%) Strand=Plus/Minus Query 363430 ATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATC 363489 || |||||| | |||||||| | || ||||||||||||||| | || ||||| ||||| Sbjct 10774 ATGAATGGTAAGATTGTTGAGAGACCACAGCATATGTTAATGAGAGTAGCTATAGGTATA 10715 Query 363490 CATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTC 363549 ||| | ||| ||||| | || |||||||| ||||| | | || ||| || Sbjct 10714 CATGGAGATGATATTGATTCGGCTATTGAAACTTATAATTTGTTGTCTGAGCGTTATTTT 10655 Query 363550 ACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGC 363609 || || || | || ||| ||| || | || || || ||| |||| || ||| Sbjct 10654 ACTCATGCTTCACCTACATTGTTTGCGGCCGCTACCAATAGACCGCAGTTGTCGTCATGC 10595 Query 363610 TTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGT 363669 || | | | ||| || |||||| || |||||||| || | || | | | ||| Sbjct 10594 TTCTTGTTGACCATGGTGGCCGATTCTATTGAGGGTATTTTCAAGTCAGTGGAACAATGT 10535 Query 363670 GCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAG 363729 || | |||||||| || || || ||||| || | ||| || | || || Sbjct 10534 GCCATGATTTCCAAATCAGCGGGTGGTATTGGCATAAATGTGCACTGCATTAGAGCTAAG 10475 Query 363730 AACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTG 363789 || || |||| |||||| || ||| ||||| ||||| || |||||| | ||| Sbjct 10474 GGCACTTCCATTGACGGCACTAACGGCACCTCAAATGGTCTGGTACCAATGCTTAGGGTG 10415 Query 363790 TTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCT 363849 ||| ||||| || | || || || |||||||| || || ||| || || |||||| Sbjct 10414 TTTAACAATGTGGCCCGTTATGTTGATCAGGGTGGTGGCAAACGCCCTGGTGCCTTTGCT 10355 Query 363850 ATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACG 363909 || ||| | |||||| ||| | ||||||||||| ||| | || | ||||||||| Sbjct 10354 ATTTATTTGGAGCCTTGGCATTCAGATATTTTTGAATTTTTGGATTTAAAGAAAAACACC 10295 Query 363910 GGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTT 363969 || || || || | || | ||||| |||||||| | ||| | | ||| ||| Sbjct 10294 GGCAAGGAAGAGCACAGAGCCAGAGATCTTTTCTATGCTTTGTGGATACCCGACTTGTTT 10235 Query 363970 ATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGT 364029 ||||| || ||||| | | | | ||||| || | || || ||| ||||||| ||| Sbjct 10234 ATGAAACGTGTGGAAGAAAATGGTGACTGGTCCCTAATGTGTCCTCACAAATGTCCCGGT 10175 Query 364030 CTTTCCGATGTATGGGGTGACGACTATGTTG--CTCTATACGAAAAGTATGAATCGGAGG 364087 || ||||| |||||||| || | | | | ||||| ||||||||| || | Sbjct 10174 CTGCAGGATGTTTGGGGTGAGGAATTCGAAGAATTGTATAC--CAAGTATGAAAAAGAAG 10117 Query 364088 GAAAGGC---TCGTA-AGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCG 364143 | ||||| ||| | | ||| || ||| || |||||||| || || || | Sbjct 10116 GTAAGGCCAATCGCACTGTCAA----GGCTCAGGCTCTTTGGTTTGCTATAATTGAAGCC 10061 Query 364144 CAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAAC 364203 || | || || || || |||||||||||||| |||||| | ||||||||||| ||| Sbjct 10060 CAAGTAGAAACCGGTACTCCCTATATGTTGTATAAAGATGCCTGCAACCGCAAAAGTAAC 10001 Query 364204 CAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACC 364263 ||||| | |||| || ||| || |||||| | || || |||||| | ||||| | Sbjct 10000 CAGCAAAATATTGGCACCATTAAGTGCAGCAACTTGTGCACAGAGATTGTAGAATATTCT 9941 Query 364264 GCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT---A 364320 || || || |||| ||||| ||||| | || || || || ||| |||||| | Sbjct 9940 GCCCCTGATGAGATAGCCGTTTGTAATTTGGCCTCCATAGCCCTTAATATGTTTGTCACA 9881 Query 364321 AAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTA--TCATGCTACTTGCA 364378 ||| || ||||| | | | | | || || | |||| ||| | Sbjct 9880 CCAGAAAAGACCTTTGATTTTAAAAAATTGAAAAATGTCACTAAAGTCAT--TACCAAGA 9823 Query 364379 ATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATA 364438 ||||| |||| | ||||||| || |||||||| | ||||| || | || |||| Sbjct 9822 ATCTCAACAAAATCATCGACATTAACTATTATCCCTTGCCTGAGGCTAGGAAATCCAATA 9763 Query 364439 TGCGTCATCGCCCGATTGGTCTTGGTGTACAGGG 364472 |||||||||| || ||||| | ||||| ||||| Sbjct 9762 TGCGTCATCGTCCTATTGGCATAGGTGTTCAGGG 9729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1301816019502650