Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq43370 95.1 1e-14 seq82145 89.7 4e-13 >seq43370 Length=3724 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 115280 TTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAG 115339 ||| | ||||| || || |||||||| | || || |||||||||||| | ||| ||| Sbjct 2356 TTATAGATGCAGATCTTCGTCAAAACTTTAACTGGTAAAACCATTACCTTGGAAGTCGAG 2415 Query 115340 TCCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTT 115399 | |||||| ||| | | || || ||||| || |||||||| ||||| Sbjct 2416 CCTTCCGACACCATTGAAAATGTCAAGGCCAAAATCCAAGACAAAGAAGGTATCCCCCCA 2475 Query 115400 GATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGAT 115459 ||||| ||| | | || | || || |||||||| ||||||| ||| || |||| Sbjct 2476 GATCAACAACGTTTGATCTTCGCTGGTAAACAATTGGAAGATGGTCGCACCTTGTCCGAC 2535 Query 115460 TATAACATTCAAAAAGAGTCTACTATACATATGGT 115494 || ||||| ||||| || || ||| ||||| |||| Sbjct 2536 TACAACATCCAAAAGGAATCCACTTTACATTTGGT 2570 >seq82145 Length=1636 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| ||||| || || | || || |||||||| || | || ||| | | Sbjct 1171 ATGCAAATCTTTGTTAAGACATTGACTGGCAAAACCATCACTTTGGAGGTTGAGCCTTCC 1230 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || ||| ||| | | || ||| |||||| || || ||||| |||| ||||| Sbjct 1231 GATACTATTGAAAATGTTAAAGCTAAAATTCAAGACAAGGAAGGAATCCCACCAGATCAA 1290 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | | |||| ||| ||||||||||| ||||| | || || | |||||||| Sbjct 1291 CAACGTTTGATTTTTGCTGGCAAACAATTGGAAGACGGGCGCACATTGTCTGATTATAAT 1350 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 || |||||||| ||||| | ||| |||| || | ||||| || || Sbjct 1351 ATACAAAAAGAATCTACATTGCATTTGGTATTACGTTTGCGTGGTGG 1397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424866694249000