Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq9860 526 3e-144 seq74052 273 3e-68 seq14616 109 7e-19 >seq9860 Length=13996 Score = 526 bits (582), Expect = 3e-144 Identities = 1403/2122 (66%), Gaps = 34/2122 (2%) Strand=Plus/Plus Query 61997 ATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATA 62056 ||||| || || | || || ||||||| ||| | ||||| | ||| ||||||| Sbjct 9144 ATGAAAGCGCCACGATCGGCGGCCATTTGTATGGTGGTCTTAACGGAAATCTCCCAAACT 9203 Query 62057 GTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGT-TTGTATTC--TGAATGGATCCACC 62112 || || || | || | || ||| || |||| | || ||| || ||||| || | Sbjct 9204 GTCTTGTATAGATCACGTA-TATGTTTGGGAATTTCTTCTATGGCTTGTATGGAGCCGCG 9262 Query 62113 ATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCT 62172 || | ||||| |||| || || ||||||| |||||| | ||||||||| || | Sbjct 9263 ATTGGAAATAATTTTATTTTTCATTTCATCATCCCATAAATCAAGTTCGGTTAAATCTTT 9322 Query 62173 AAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATT 62232 ||| | ||| |||| || || | |||||||| ||||| || | | |||||||||||| Sbjct 9323 AAGCAAATGATGATTGACAACATTGAATTCTCCCGACAAAACACGTCTAGTGTAAATATT 9382 Query 62233 ACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGG 62292 ||| |||||||| | || ||||| || || | |||||| || || || || || || Sbjct 9383 GGAGGTGTACGGTTCAAAGGATTCATTGTTGCCTAGAATTTGTGCGGTCGAAGCTGTGGG 9442 Query 62293 CATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTC--TGATTTTATCTTTTAGA 62350 ||| || || | | ||| ||| | | ||| ||||| ||||||| || || | Sbjct 9443 CATGGGGGCTAATAGCAAAGAATTGCGTACACC--ATGTTGCTTGATTTTCTCCTTCAAC 9500 Query 62351 GGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCG 62410 | ||| ||||| | || | ||| |||||| ||||| Sbjct 9501 TCTGACCAGTTCCACAAGTCTGTGGGTGTTTTATTCCACATATCGTATTGTAGTATACCC 9560 Query 62411 TTACTGGC-GTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACA 62469 ||||| | | || | || ||| || || |||| || || || || || | |||||| Sbjct 9561 TTACTTACTGGAC-AGCCGGGATAAGTTTCATATGTGCCATCTTTTTCGGCCAATTCACA 9619 Query 62470 ACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGC 62529 ||| || || ||||| || |||||||| |||||||| |||| | ||||| ||| Sbjct 9620 ACTAGCTTCCAATGCGCCATAATAAATAGTTTCGAAAATCTGTTGATTTAACAAAAACGC 9679 Query 62530 --TTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACA 62587 || || || ||| | || ||| | | ||| || | || || || || |||||| Sbjct 9680 CTTTTCA--CTCTCATAGGGGTAACGCATTAAAATCAAAGTATCGGCAAAACCCTGAACA 9737 Query 62588 CCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTC--AGCTTCTGGAATAGGATAAT 62645 || || || ||||| | ||| | | |||| || |||| ||| || || | ||||||| Sbjct 9738 CCTATGCCAATAGGACGATGACGCATATTGGA--TTTCCTAGCCTCAGGCAAGGGATAAT 9795 Query 62646 AATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTT 62705 | ||||| || || ||||| |||||||| || ||| ||||| |||| |||| || Sbjct 9796 AGTTAATGTCGATGATTTTGTTGAGATTCTTGGTAATGACTTTAGTGACATTTTTCAATT 9855 Query 62706 TGAGAAAATCAAATCGCCCATCTATT---ACAAACATGTTCAATGCAACAGATGCCAGAT 62762 | ||||||||| | ||| | |||||||| || | || | || |||| || Sbjct 9856 TTTTAAAATCAAAGGTCTTTTCTGGTGTGACAAACATATTAAGGGCTATGGAGGCCAAAT 9915 Query 62763 TACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTAC 62822 |||||||||||| ||||| || | | ||||| || ||||| ||||| | || || | Sbjct 9916 TACAAACGGCTATCTCATCAGGGGCAGAATATTCTACAATCTCTGTGCACAAGTTGCTGC 9975 Query 62823 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 62882 |||| ||||| || | |||||| || ||||| || ||| || ||||| ||||| | | Sbjct 9976 ACTTAATGGTGCCAATATTTTGCTGGTTACTTTTGCGGTTGCAGGCATCTTTATACAACA 10035 Query 62883 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 62942 | | |||||||| ||||| | || | ||| || || || ||| | | |||||| Sbjct 10036 TATAGGGAGTACCGGTTTCTACTTGGGCTTCAATTATAGCAAACCAAAGAGCCTGAGCCT 10095 Query 62943 TTATTATA-GATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCG 63001 | | | |||| | | | || || |||| || ||||||||| |||||| || Sbjct 10096 TGACAGTGCGATTGGCCTTACCTT-CTTTTTCATACTTGGTATACAATTCTTCGAATTCC 10154 Query 63002 TCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCG 63061 || |||||||||| | ||| || ||||||| | |||||||| | ||||| || || Sbjct 10155 TCACCCCAAACATCCTGCAGACCGGGACATTTGTGAGGACACATTAGGGACCAGTCACCA 10214 Query 63062 TCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCT 63120 | || | ||| ||||||||||| | || || ||||| | ||| ||| || |||||||| Sbjct 10215 TTTTCTTCCACACGTTTCATAAACAAGTCGGGTATCCACAAAGC-ATAGAAAAGATCTCT 10273 Query 63121 GGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGA 63180 || ||| || || || || || || || || || | ||| | || | | |||||| || Sbjct 10274 GGCTCTGTGCTCTTCCTTGCCGGTGTTTTTCTTTAAATCCAAAAATTCAAAAATATCTGA 10333 Query 63181 ATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTAT 63240 |||||| || ||||| || || || | | ||||| |||||| || |||||||| | Sbjct 10334 ATGCCAAGGCTCCAAATAAATAGCAAAGGCACCAGGGCGTTTGCCACCACCCTGATCAAC 10393 Query 63241 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATT 63300 || | || || ||| | || || | |||||| | | |||||| || || || || Sbjct 10394 ATAACGGGCCACATTGTTAAACACCCTAAGCATTGGTACCAGACCATTTGAGGTGCCGTT 10453 Query 63301 GGTCCCTGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACCTATTCCC 63358 || || || | | || | || | ||| | | | ||| || || || || Sbjct 10454 AGTGCCGTCAATGGAAGTGCCCTTAGCTCTAATGCAGTGCACATT--TATGCCAATACCA 10511 Query 63359 CCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTA 63418 || || ||| || || | || ||| ||| | | | | || ||||| ||| | Sbjct 10512 CCCGCTGATTTGGAAATCATGGCACATTGTTCCACTGACTTGAAAATACCCTCAATAGAA 10571 Query 63419 TCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTA 63478 || ||| |||| | | | || || |||| || | | | | || | || | Sbjct 10572 TCGGCCACCATGGTCAACAAGAAGCATGACGACAACTGCGGTCTATTGGTAGCGGCCGCA 10631 Query 63479 AATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATA 63538 || || ||||| ||||| |||||||| | ||||| | | ||| || || |||||| Sbjct 10632 AACAATGTAGGTGAAGCATGAGTAAAATAACGCTCAGACAACAAATTATAAGTTTCAATA 10691 Query 63539 GCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGT 63598 || || || ||||| | ||| || |||| || || | ||||||||| ||||| ||| Sbjct 10692 GCCGAATCAATATCATCTCCATGTATACCTATAGCTACTCTCATTAACATATGCTGTGGT 10751 Query 63599 CTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCA 63658 || ||||| ||||| || ||||||| ||| || ||| | |||| || || || || Sbjct 10752 CTCTCAACAATCTTACCATTCATTTTCAGCAAATAAGATCTCTCCAGTGTCTTGAAGCCG 10811 Query 63659 AAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATAT 63718 || |||||||| |||||| || || |||||||| ||| || | || || | Sbjct 10812 AAGTAGTTGTAGCCAAAGTCACGATCATAAATAATTGACGAATTTAAACGTTCTGCATTT 10871 Query 63719 TTGTTAACTACATCCATGGTAATACT-TGAAATAATAGGAAAATGTTTCCCATTTTTAGG 63777 || | ||||||| | || || | ||||| | ||| | || |||| | | Sbjct 10872 TTCTGCACTACAT-TGTAGTGGTATTCGGAAATCAAAGGCGATGGTCTCCCCGTCTCTTT 10930 Query 63778 ATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTG 63837 ||| ||| | | | | ||| || || || |||| |||||| ||||||||||| Sbjct 10931 ATTAACAAAATGATACAGATCACTTATAACCTCTGAGAATACTTTTTTCGTTTCTTTGTG 10990 Query 63838 TAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACA 63897 | ||| ||||| || || | ||| || | ||||||||||| ||| | ||||| | Sbjct 10991 CAAATTGGATACTGCAATACGAGCTGCCAATATGGCATAATCGCCATGATTAGTAGTTAA 11050 Query 63898 AGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATATAT 63957 || || || | || || |||| | | || | |||| || || |||||| || | Sbjct 11051 TGTAGCAGCAGTCTCTGCCGCCAAATTATCTAGTTCTTGTGTAGTAACACCACAGTAAAG 11110 Query 63958 TCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATA 64017 || | || ||||||| | || | ||||| | ||| | || |||||||| Sbjct 11111 GCCATTAATTACCTTCAGTGTAATGGCCACTGGATCAACGAAATCCATATTCAAGCCATA 11170 Query 64018 ACATAATTTTCTAATACGAGATGTGATTTTATCAAACATG-ACATTTTCCTTGTATCCAT 64076 |||| ||| ||| || ||||| |||||||| || ||| || | ||||||| ||||| Sbjct 11171 GCATAGCTTTTGAATTCGTGATGTTATTTTATCGAA-ATGAACCTCTTCCTTGCGTCCAT 11229 Query 64077 TTCGTTTAATGACAAACATTTT 64098 |||||||| ||||||| ||| Sbjct 11230 CTCGTTTAAGAACAAACAATTT 11251 >seq74052 Length=11856 Score = 273 bits (302), Expect = 3e-68 Identities = 500/726 (69%), Gaps = 15/726 (2%) Strand=Plus/Plus Query 32476 CCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAAT 32535 ||||||| | ||| | ||| || ||||||||||| ||| | ||||| || ||||| Sbjct 5433 CCAATTCCACTAGCAAACGATCGGCCACAAATTCTATGTATTCTGACATCAATTTACAAT 5492 Query 32536 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 32595 |||| ||||| | || || || | ||| | ||||| |||||||||||||| |||| Sbjct 5493 TCATGCCTATCAAATTGACGGGCAAAGCATCTGTAAGGAATTCTTGTTCAATTTTCACCG 5552 Query 32596 CGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACA 32655 | || || ||||| | | | | || ||| || | | | ||||||||||||| Sbjct 5553 CTTCGGTGATAATTTCAATAATTCTCTCCCGACTGGGACGTTGTACCAAATGTTTAAACA 5612 Query 32656 TCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACG 32715 | || || ||||| || |||| |||||| || | ||| ||||| ||||| || | Sbjct 5613 TTAATACCGCAAAATCACAATGTAAACCCTCATCACGTGAAATCAATTCATTGGAGAATG 5672 Query 32716 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAA 32775 | || || ||||| || ||||| || || ||||| || ||||| ||||| ||| | Sbjct 5673 TAAGACCAGGCATAAGACCACGTTTCTTTAGCCAGAAGATGGAGGCAAAACTGCCACTGA 5732 Query 32776 AGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAA-CCGGCGCTGTCA 32834 ||||||| || || || || ||||| ||||||| | || ||| || | || | || Sbjct 5733 AGAAAATACCCTCCACAGCAGCAAAAGCAATAATACGTTCACCAAAATTAGCCGATTTCG 5792 Query 32835 TG--TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAG 32892 | ||||| ||||||||| ||||| || ||| ||||| || || || | Sbjct 5793 AGGAAATCCAAGCCATAGCCCAATCAGCCTTACGCTTAACAGCCGGCATAGTTTCAATGG 5852 Query 32893 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTAT 32952 ||||||||||||| | | | | ||| |||| ||| ||||||| | || ||||| Sbjct 5853 CATTAAAGAGATAATCACGCTGCTCGCGATCCTTAATATAACTATCAATTAGAATACTAT 5912 Query 32953 ACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGG 33012 ||||||| || || | ||||| ||||| ||||| || || ||||| || | ||||| | Sbjct 5913 ACATTTCAGAGTGTACATTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGTGCCTCTG 5972 Query 33013 TAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGG 33072 ||| ||||||||| | || ||||| | | ||||||||| || || || || | Sbjct 5973 TAACTTGTACTTCTTGGGAGAAGCGTTCAACAAGATTTTCATTGACAATGCCATCGGAAG 6032 Query 33073 CTGCAAAAAACGCCAATACATGTTTTATAAAAT---ATTTTTCGTCTGGTGTTAGTTTAT 33129 | ||||| || || | |||||| || |||| || | ||| |||| ||| | | Sbjct 6033 CAGCAAAGAAAGCTAGAACATGTGAAATGAAATGACGTTCATTGTC-GGTG--AGTCTTT 6089 Query 33130 TCCAATC---ATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCT 33186 ||| || |||| ||||| || | |||||||||||| || |||||||| || || | Sbjct 6090 CCCAGTCGGAATTG---TCTTTGGAAAGATCCACTTCTTCTACAGTCCAAAAAGAAGCTT 6146 Query 33187 CTGCCT 33192 | |||| Sbjct 6147 CGGCCT 6152 >seq14616 Length=5376 Score = 109 bits (120), Expect = 7e-19 Identities = 89/108 (82%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 27511 AATACCTAATTCCTTGACCTGAGTTAATGATCTCCAATCCATATTAGCGCTTCCTAAATA 27570 |||||| ||||| || ||||| ||||| |||||||| |||||||| || || || ||||| Sbjct 1340 AATACCCAATTCTTTAACCTGTGTTAAAGATCTCCAGTCCATATTGGCACTGCCCAAATA 1399 Query 27571 AATATGTGTATTATCAGATATCCAAAATTTTGTATGAAGAACTCCTCC 27618 ||| ||| | ||||| || ||||||||||||||||| | ||| || || Sbjct 1400 AATGTGTTTGTTATCGGAAATCCAAAATTTTGTATGTAAAACACCACC 1447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632902729170000