Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq9860 262 3e-65 seq82145 168 6e-37 seq10127 163 2e-35 seq43370 147 2e-30 seq10922 136 3e-27 >seq9860 Length=13996 Score = 262 bits (290), Expect = 3e-65 Identities = 599/891 (67%), Gaps = 29/891 (3%) Strand=Plus/Plus Query 128983 ATTTCCCACACCGTTTTGTAAAGCTCTCTCACGTGTTTTGGTATTTCTTCAATGTTCTGC 129042 || ||||| || || ||||| || || | | ||||| || |||||||| ||| || Sbjct 9192 ATCTCCCAAACTGTCTTGTATAGATCACGTATATGTTTGGGAATTTCTTCTATGGCTTGT 9251 Query 129043 ACGCTGCCGTTGTTTGCAATAATTTTGTTTCGCATCTGTTCGTTGTACAAATTCAGTTTG 129102 | | |||| || | ||||||||| ||| ||| | || | | |||| |||| | Sbjct 9252 ATGGAGCCGCGATTGGAAATAATTTTATTTTTCATTTCATCATCCCATAAATCAAGTTCG 9311 Query 129103 ATCAAATCGTCGGTCAAGTATTTGTTTATTACTTGAAAGTCACCCGCCAAAACGCGCCGA 129162 | ||||| | ||| | | || | || | || || |||| |||||| || | | Sbjct 9312 GTTAAATCTTTAAGCAAATGATGATTGACAACATTGAATTCTCCCGACAAAACACGTCTA 9371 Query 129163 ACGTAAATGTTGTTGGTGAACGGCTCAAACGATTCATTGTTGCCTAATATTTGAGCCGTT 129222 |||||| ||| |||| |||| ||||| |||||||||||||||| ||||| || || Sbjct 9372 GTGTAAATATTGGAGGTGTACGGTTCAAAGGATTCATTGTTGCCTAGAATTTGTGCGGTC 9431 Query 129223 GTCGCGGTGGGCATGTAAGCCA--CGCAAAGCGAGTTTCGCAAACCGTGCTGTTTAATGT 129280 | || ||||||||| || | ||||| || || || | ||| || || || || | Sbjct 9432 GAAGCTGTGGGCATGGGGGCTAATAGCAAA--GAATTGCGTACACCATGTTGCTTGATTT 9489 Query 129281 CtttttttAATTGTGTCCAGTCCCACATCGATGTGGGTGTGTGATTCCACAAGTCGTATT 129340 | || || | || ||||| ||||| ||||||||| | |||||||| ||||||| Sbjct 9490 TCTCCTTCAACTCTGACCAGTTCCACAAGTCTGTGGGTGTTTTATTCCACATATCGTATT 9549 Query 129341 GCAATATACCCAAACTGGCGGGA----CTGGAAAAGTAGGAATCGTGCACGCCGTAAGCT 129396 | | ||||||| ||| | ||| | ||| |||| | |||| | || Sbjct 9550 GTAGTATACCCTTACTTACTGGACAGCCGGGATAAGTTTCATATGTGC-------CATCT 9602 Query 129397 TTT---GCCAATTCGCAACTCGCTTCCAATGCGCCAAAATAAATTGTTTCGGCAATTTTG 129453 ||| |||||||| ||||| ||||||||||||||| ||||||| ||||| | || | || Sbjct 9603 TTTTCGGCCAATTCACAACTAGCTTCCAATGCGCCATAATAAATAGTTTC-GAAAATCTG 9661 Query 129454 GTG-TTCAACACTTTGGCCTGGTCGCTTTCGTACGGCATACGC---AACATGGCAAATGT 129509 || || |||| |||| || || || || || |||| || || |||| || Sbjct 9662 TTGATTTAACAAAAACGCCTTTTCACTCTCATAGGGGTAACGCATTAAAAT--CAAA-GT 9718 Query 129510 GTCGGCCAAACCTTGAATACCCACACCGATGGGTCGATGTTTTCTATTGGATTTTTGTGC 129569 ||||| ||||| |||| ||| | || || || ||||| |||||||||| || Sbjct 9719 ATCGGCAAAACCCTGAACACCTATGCCAATAGGACGATGACGCATATTGGATTTCCTAGC 9778 Query 129570 CGACAACAAGGGATAGTAGTTGATGTCTATAATTTTGTTTAAATTCTTGACCACAATTTT 129629 | ||||||||| ||||| ||||| || |||||||| | ||||||| | | ||| Sbjct 9779 CTCAGGCAAGGGATAATAGTTAATGTCGATGATTTTGTTGAGATTCTTGGTAATGACTTT 9838 Query 129630 CGTTACGTATTTTAACATTTCAAAATTGTACTCGCCTACATCGATGTCGACAAATTGATT 129689 || || | ||| || ||| ||||| | | || | ||| |||||| ||| Sbjct 9839 AGTGACATTTTTCAATTTTTTAAAAT--CAAAGGTCTTTTCTGGTGT-GACAAACATATT 9895 Query 129690 GACACAAATCGAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAAT 129749 | || ||||||||||| || ||||| | || | | || || || ||||| Sbjct 9896 AAGGGCTATGGAGGCCAAATTACAAACGGCTATCTCATCAGGGGCAGAATATTCTACAAT 9955 Query 129750 TTCGGCGCACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGATTACTTTTCATGTT 129809 || | |||||| || || ||||||||||| | || | || |||||||| ||| Sbjct 9956 CTCTGTGCACAAGTTGCTGCACTTAATGGTGCCAATATTTTGCTGGTTACTTTTGCGGTT 10015 Query 129810 GCAAGCATCTTTGTACATCATGTACGGCGTGCCCGTTTCGACTTGCGTTTC 129860 ||| |||||||| |||| ||| || || || || ||||| ||||| | ||| Sbjct 10016 GCAGGCATCTTTATACAACATATAGGGAGTACCGGTTTCTACTTGGGCTTC 10066 Score = 82.4 bits (90), Expect = 6e-11 Identities = 123/175 (70%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 128779 TTGTCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTACATGCCT 128838 || || |||||||||| |||||| | ||||| ||||| || | |||||| |||||||| Sbjct 8923 TTATCTACGGTAAATTGAATAGCATTGGCTGCTGGCTTTGTTCTCAAATAATACATGCCG 8982 Query 128839 GTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGGTGGGT 128898 || || || || |||||| | | | || || | |||||| |||| | || Sbjct 8983 GTCTTTAAGCCTGATTTCCAGGCATAGAAATGTATGGAGGTCAATTTGCCGTAATTTGGC 9042 Query 128899 TGACTCaaaaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGG 128953 | || | ||||| || |||||||||||||| || || | ||| ||||||| Sbjct 9043 TCGGCCACATGTATATTGAACGATTGACTTTGATCTATGAAAGCGCCACGATCGG 9097 >seq82145 Length=1636 Score = 168 bits (186), Expect = 6e-37 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| |||||||| ||||| |||||||| | || | || || ||| | | Sbjct 1399 ATGCAAATTTTCGTTAAAACATTAACGGGTAAAACAATTACATTAGAGGTTGAACCTTCG 1458 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||| |||||||| || |||||||| || |||||| Sbjct 1459 GATACTATAGAAAATGTTAAAGCTAAAATCCAAGACAAAGAAGGTATTCCCCCAGATCAA 1518 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || || || || || ||||| || ||| |||||| | ||||| |||||| Sbjct 1519 CAGCGTTTGATTTTCGCTGGTAAGCAGTTGGAAGATGGCCGCACTTTATCCGACTACAAC 1578 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||||||||||||| | || || || ||||| ||||| || ||| Sbjct 1579 ATTCAAAAAGAATCCACCCTTCACTTGGTATTGCGTTTGCGTGGTGGT 1626 Score = 149 bits (164), Expect = 5e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| |||||||| || || || || ||||| ||||| | || || || | || Sbjct 1171 ATGCAAATCTTTGTTAAGACATTGACTGGCAAAACCATCACTTTGGAGGTTGAGCCTTCC 1230 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||||||||||||||| || || ||||| |||||| Sbjct 1231 GATACTATTGAAAATGTTAAAGCTAAAATTCAAGACAAGGAAGGAATCCCACCAGATCAA 1290 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || ||||| |||||||| || || || ||||| | || ||||| || Sbjct 1291 CAACGTTTGATTTTTGCTGGCAAACAATTGGAAGACGGGCGCACATTGTCTGATTATAAT 1350 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || ||||||||||| || | ||||| || || || ||||| || || Sbjct 1351 ATACAAAAAGAATCTACATTGCATTTGGTATTACGTTTGCGTGGTGG 1397 >seq10127 Length=8452 Score = 163 bits (180), Expect = 2e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| |||||||| || ||||| ||||| |||| | ||||| ||| | || Sbjct 7360 ATGCAGATTTTCGTTAAAACCTTGACCGGCAAAACTATCACCTTGGAAGTTGAACCTTCC 7301 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || | | || ||||| || || ||||| |||||||| || ||||| Sbjct 7300 GATACCATTGAGAACGTGAAGGCTAAAATCCAGGATAAGGAAGGTATTCCCCCAGATCAG 7241 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || || ||||||||||| || || ||| |||||| | || || |||||| Sbjct 7240 CAACGTTTGATCTTCGCCGGCAAACAATTGGAAGATGGACGCACCCTTTCTGACTACAAC 7181 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || ||||||||| | |||||||| ||||| ||||| || ||| Sbjct 7180 ATCCAGAAGGAATCCACCCTCCATTTAGTATTGCGTTTGCGTGGTGGT 7133 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || || ||||||||||| |||| | ||||| || | | Sbjct 7132 ATGCAAATCTTCGTAAAGACCTTGACCGGTAAAACCATCACCTTGGAAGTCGAGCCTTCG 7073 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | |||| || || || || ||||| |||||||| || ||||| Sbjct 7072 GACACTATTGAAAACGTCAAGGCTAAGATCCAGGATAAGGAAGGTATTCCTCCAGATCAG 7013 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || |||||||||||||| || || ||| ||||| | || || |||||| Sbjct 7012 CAACGTTTGATCTTTGCCGGCAAACAATTGGAAGATGGTCGCACTTTGTCTGACTACAAC 6953 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || ||||| || |||||| | ||||| || | || | || ||||| Sbjct 6952 ATCCAAAAGGAGTCCACCCTCCATTTGGTGCTACGTCTTCGTGGAGG 6906 Score = 114 bits (126), Expect = 1e-20 Identities = 110/141 (78%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 22306 ATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAG 22365 || ||||| ||||| |||||||| || || ||||||||||| || ||||| || ||||| Sbjct 7819 ATCCAAGATAAGGAAGGTATTCCTCCAGACCAACAACGTCTGATCTTTGCTGGTAAACAA 7760 Query 22366 TTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTA 22425 || || ||| ||||||| | || || |||||||| ||||| ||||| || | || || Sbjct 7759 TTGGAAGATGGCCGCACCCTTTCGGACTACAACATCCAAAAGGAATCTACTCTCCACTTG 7700 Query 22426 GTTTTGCGATTGCGCGGAGGT 22446 |||||||| || || || ||| Sbjct 7699 GTTTTGCGTTTACGTGGTGGT 7679 >seq43370 Length=3724 Score = 147 bits (162), Expect = 2e-30 Identities = 161/214 (75%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 22214 TAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAA 22273 || ||||||| || || || ||||||||||| |||||||| | || | ||||| || Sbjct 2357 TATAGATGCAGATCTTCGTCAAAACTTTAACTGGTAAAACCATTACCTTGGAAGTCGAGC 2416 Query 22274 CCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCG 22333 | |||| ||| | || || |||| ||||| |||||||| || ||||| || || | Sbjct 2417 CTTCCGACACCATTGAAAATGTCAAGGCCAAAATCCAAGACAAAGAAGGTATCCCCCCAG 2476 Query 22334 ATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATT 22393 ||||||||||| | || || || || ||||| || || ||| |||||| | ||||| | Sbjct 2477 ATCAACAACGTTTGATCTTCGCTGGTAAACAATTGGAAGATGGTCGCACCTTGTCCGACT 2536 Query 22394 ACAACATTCAAAAAGAATCCACCATACATTTAGT 22427 ||||||| ||||| |||||||| ||||||| || Sbjct 2537 ACAACATCCAAAAGGAATCCACTTTACATTTGGT 2570 >seq10922 Length=8781 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| ||||| |||| ||||| || | |||||||| || || | | Sbjct 3233 ATGCAGATTTTTGTCAAAACCCTAACGGGTAAGACCATTACTCTTGAGGTCGAGCCGTCG 3174 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || ||||| || ||||| ||||| || || |||||||| |||||| Sbjct 3173 GACACTATTGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCACCAGATCAA 3114 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || || || || ||||| || || ||| || ||| |||| |||||||| Sbjct 3113 CAACGTTTGATTTTCGCTGGAAAACAATTGGAAGATGGTCGTACCCTCTCGGATTACAAT 3054 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||| |||| ||||||| | || ||||| ||||| | || || ||| Sbjct 3053 ATTGAAAAGGAATCCATTCTGCACTTAGTATTGCGTCTTCGTGGTGGT 3006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419256996322375