Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq10127 127 5e-24 seq10922 91.5 3e-13 >seq10127 Length=8452 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||||| || ||||||||||||| ||||||||||| |||||| Sbjct 6912 CGAAGACGTAGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTG 6971 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||||| || || ||||| ||||| | ||| ||||| || ||| ||| ||| Sbjct 6972 CGACCATCTTCCAATTGTTTGCCGGCAAAGATCAAACGTTGCTGATCTGGAGGAATACCT 7031 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| ||| ||| | ||||| | | || || ||||| Sbjct 7032 TCCTTATCCTGGATCTTAGCCTTGACGTTTTCAATAGTGTCCGAAGGCTCGACTTCCAAG 7091 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || ||||| || | || || || || ||||| Sbjct 7092 GTGATGGTTTTACCGGTCAAGGTCTTTACGAAGATTTG 7129 Score = 109 bits (120), Expect = 1e-18 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 ||||| || || ||||| |||| ||||||||||| | || | ||||||||||| || Sbjct 7158 TGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGTCCATCTTCCAATTGT 7217 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || ||||||||||| | ||| ||||| || || ||| ||||| ||||| || || Sbjct 7218 TTGCCGGCGAAGATCAAACGTTGCTGATCTGGGGGAATACCTTCCTTATCCTGGATTTTA 7277 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||||||| || | ||| || | | ||| || ||||| ||||| || || || || Sbjct 7278 GCCTTCACGTTCTCAATGGTATCGGAAGGTTCAACTTCCAAGGTGATAGTTTTGCCGGTC 7337 Query 199607 AGAGTTTTCACAAAAATTTG 199626 | ||||| || ||||| || Sbjct 7338 AAGGTTTTAACGAAAATCTG 7357 >seq10922 Length=8781 Score = 91.5 bits (100), Expect = 3e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| ||| | || ||||||| | ||||| || | | || Sbjct 3013 CGAAGACGCAATACTAAGTGCAGAATGGATTCCTTTTCAATATTGTAATCCGAGAGGGTA 3072 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||||| || ||||| ||||| || | ||| || || || || ||||||| Sbjct 3073 CGACCATCTTCCAATTGTTTTCCAGCGAAAATCAAACGTTGTTGATCTGGTGGAATTCCT 3132 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| ||||||||||| || || ||| | ||||| | | || || || | Sbjct 3133 TCTTTGTCCTGAATCTTGGCTTTGACATTTTCAATAGTGTCCGACGGCTCGACCTCAAGA 3192 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||||||||| || ||||| |||||||| || Sbjct 3193 GTAATGGTCTTACCCGTTAGGGTTTTGACAAAAATCTG 3230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177530813294025