Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq10127 102 9e-17 >seq10127 Length=8452 Score = 102 bits (112), Expect = 9e-17 Identities = 164/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 46358 TATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTG 46417 || ||| |||||| | | ||| | ||||| ||| | || |||||||||||| ||| Sbjct 6897 TAGTATGCGCCTCCACGAAGACGTAGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTG 6956 Query 46418 TAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGG 46477 ||||| || | |||||| | || || | || |||||||| || ||||| || ||||| Sbjct 6957 TAGTCAGACAAAGTGCGACCATCTTCCAATTGTTTGCCGGCAAAGATCAAACGTTGCTGA 7016 Query 46478 TCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTC 46537 || | || | | ||||| ||| |||||| ||||| | | | ||||| Sbjct 7017 TCTGGAGGAATACCTTCCTTATCCTGGATCTTAGCCTTGACGTTTTCAATAGTGTCCGAA 7076 Query 46538 GATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || || |||| ||||||||||| || |||| || || || ||||||||||| Sbjct 7077 GGCTCGACTTCCAAGGTGATGGTTTTACCGGTCAAGGTCTTTACGAAGATTTGCAT 7132 Score = 96.9 bits (106), Expect = 4e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 46376 AAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGC 46435 |||||||| || | ||| | || ||||| ||||| |||||||| || || ||||| Sbjct 7143 AAACGCAATACTAAATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGT 7202 Query 46436 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCC 46495 | || || | || ||||||||||| ||||| || ||||| || | || | | ||| Sbjct 7203 CCATCTTCCAATTGTTTGCCGGCGAAGATCAAACGTTGCTGATCTGGGGGAATACCTTCC 7262 Query 46496 TTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTG 46555 || ||| ||| || ||| | || | | || ||| | ||| || |||| ||| Sbjct 7263 TTATCCTGGATTTTAGCCTTCACGTTCTCAATGGTATCGGAAGGTTCAACTTCCAAGGTG 7322 Query 46556 ATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||||||| |||| |||||||| || || ||||| Sbjct 7323 ATAGTTTTGCCGGTCAAGGTTTTAACGAAAATCTGCAT 7360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564587845929000