Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq74052 129 7e-25 >seq74052 Length=11856 Score = 129 bits (142), Expect = 7e-25 Identities = 459/697 (66%), Gaps = 23/697 (3%) Strand=Plus/Plus Query 119324 ACGATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGATT 119383 |||||||| ||| | || || ||||| |||||| || ||||||| ||||| | ||| Sbjct 5449 ACGATCGGCCACAAATTCTATGTATTCTGACATCAATTTACAATTCATGCCTATCAAATT 5508 Query 119384 ACACGGG-AGAGCATCGAGGATGAAGTTCTTCT-CGATCTCCACAGCTTCTTTCACGATG 119441 ||||| | |||||| | ||| ||||| | | || | ||| ||||| | | || Sbjct 5509 G-ACGGGCAAAGCATCTGTAAGGAA-TTCTTGTTCAATTTTCACCGCTTCGGTGATAATT 5566 Query 119442 GAGTGAATAGTT-TCTGTCGA-TGGTTTGTT-TCTCAAGAGTTTAAACAACTCTACGGCA 119498 | |||| || ||| ||| ||| ||| | ||| ||||||||| ||| ||| Sbjct 5567 ---TCAATAATTCTCTCCCGACTGGGACGTTGTACCAAATGTTTAAACATTAATACCGCA 5623 Query 119499 AATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGC 119558 || || ||| | || ||||| || || || | ||||| ||| ||| |||||| Sbjct 5624 AAATCACAATGTAAACCCTCATCACGTGAAATCAATTCATTGGAGAATGTAAGACCAGGC 5683 Query 119559 ATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCC 119618 || || || | |||||||||||| ||||||| |||||| ||| ||||| || ||| Sbjct 5684 ATAAGACCACGTTTCTTTAGCCAGAAGATGGAGGCAAAACTGCCACTGAAGAAAATACCC 5743 Query 119619 TCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTT-GTCGAA--CCAC 119675 |||||| || ||||| | | ||| ||| ||||| || || | ||| ||| Sbjct 5744 TCCACAGCAGCAAAAGCAATAATACGTTCACCAAAATTAGCCGATTTCGAGGAAATCCAA 5803 Query 119676 TTGAGAGCCCAGTTGGCCTTACGCTCTATGCAG--GGGACAGTTTGGATGGCTTCGAAAA 119733 | |||||| | |||||||||| || ||| || | ||||| ||||| | || | Sbjct 5804 GCCATAGCCCAATCAGCCTTACGCT-TA-ACAGCCGGCATAGTTTCAATGGCATTAAAGA 5861 Query 119734 GTTGCTTCTTTTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCTCAC 119793 | | | | | | |||||||||||| ||||||| || || || | ||| Sbjct 5862 GATAATCACGCTGCTCGCGATCCTTAATATAACTATCAATTAGAATACTATACATTTCAG 5921 Query 119794 CATGAACCATTTCATTGTGTGACTGATAGGCATAAAATGAGCGAGCTTCGGAAATTTGCA 119853 || || |||| || || || |||| || |||| || || | || ||| | Sbjct 5922 AGTGTACATTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGTGCCTCTGTAACTTGTA 5981 Query 119854 CTTCGTCAGCAAAATTGTT-GTTGATATTTTCAAAAACAATTCCATCGGATCCAGCGAAG 119912 |||| | | | || ||| | ||||||| ||||| |||||||| |||| ||| Sbjct 5982 CTTC-TTGGGAGAAGCGTTCAACAAGATTTTCATTGACAATGCCATCGGAAGCAGCAAAG 6040 Query 119913 AATGCT--AAGATGTACTTTATGAATTTCTGTTCATTATCGTTGAGTGTTTTCCAGTCGT 119970 || ||| || |||| ||||| | ||||||| ||| ||||| ||| ||||||| Sbjct 6041 AAAGCTAGAACATGT--GAAATGAAATGACGTTCATTGTCGGTGAGTCTTTCCCAGTCGG 6098 Query 119971 CCATATCTTTAGACAAGTCCACCTCTTCAGCTGTCCA 120007 | ||||| || | ||||| ||||| | ||||| Sbjct 6099 AATTGTCTTTGGAAAGATCCACTTCTTCTACAGTCCA 6135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588298125435000