Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq9995 87.8 2e-12 >seq9995 Length=10819 Score = 87.8 bits (96), Expect = 2e-12 Identities = 169/245 (69%), Gaps = 6/245 (2%) Strand=Plus/Plus Query 159538 CTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGA 159597 || ||||| ||||||| |||||||| || || || ||||| ||| || | | | Sbjct 5393 CTATCATGCCTTATGATCACATATCCCTCAACTATGGGCGTATTCGAAGAAACCGT--GG 5450 Query 159598 CAGATATGTAAGATTG--TTCATGAGA-ATGGTGGTCAGGTATATCTTGATGGTGCAAAT 159654 | || || | || | ||||| ||| |||| || || || ||| | ||||| || ||| Sbjct 5451 CCGACATTTGCGAATTAATTCAT-AGACATGGGGGCCAAGTGTATTTAGATGGCGCCAAT 5509 Query 159655 CTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTA 159714 | ||||| || || ||||| || |||| ||||| ||||| | ||| || Sbjct 5510 ATGAATGCCCAAGTGGGTCTTTGTCGCCCCGGTGATTATGGAAGTGATGTTTCCCATTTA 5569 Query 159715 AACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATT 159774 || | || || || |||||||||||||| || ||||| ||||| || | ||||| ||| Sbjct 5570 AATCTGCACAAAACTTTCTGTATTCCACACGGTGGTGGTGGTCCAGGAATGGGTCCAATT 5629 Query 159775 GGTGT 159779 || || Sbjct 5630 GGAGT 5634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587374389822000