Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq74052 232 8e-56 seq14616 102 1e-16 >seq74052 Length=11856 Score = 232 bits (256), Expect = 8e-56 Identities = 470/692 (68%), Gaps = 8/692 (1%) Strand=Plus/Plus Query 37010 ATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTAC 37069 ||| || |||||||||||||||| |||| | || | | || || || || | || || Sbjct 5452 ATCGGCCACAAATTCTATGTATTCTGACATCAATTTACAATTCATGCCTATCAAATTGAC 5511 Query 37070 TGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATATTAAC 37129 || | |||||| ||| ||| || ||| ||| | || || || | | || | | Sbjct 5512 GGGCAAAGCATCTGTAAGGAATTCTTGTTCAATTTTCACCGCTTCGGTGATAATTT---C 5568 Query 37130 AATAACT-TCTTCAGTTGGGG--GATATTTTAAATATTTAAACAATAAACATGCAAAATC 37186 ||||| | ||| | | ||| | | | |||| |||||||| ||| |||||||| Sbjct 5569 AATAATTCTCTCCCGACTGGGACGTTGTACCAAATGTTTAAACATTAATACCGCAAAATC 5628 Query 37187 ACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAA 37246 |||||||||||| ||||| | ||||||||||| || || || | || ||||| | Sbjct 5629 ACAATGTAAACCCTCATCACGTGAAATCAATTCATTGGAGAATGTAAGACCAGGCATAAG 5688 Query 37247 ACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAAC 37306 ||| | ||| || | ||| || || | |||||| ||| ||||||||||| || || Sbjct 5689 ACCACGTTTCTTTAGCCAGAAGATGGAGGCAAAACTGCCACTGAAGAAAATACCCTCCAC 5748 Query 37307 TGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCA-GAAATCCAttttt 37365 || ||||| || | || |||| ||| ||| || | || | |||||||| Sbjct 5749 AGCAGCAAAAGCAATAATACGTTCACC-AAAATTAGCCGATTTCGAGGAAATCCAAGCCA 5807 Query 37366 ttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGt 37425 | | |||||| ||||| |||||| || |||||||| || || |||||| | | Sbjct 5808 TAGCCCAATCAGCCTTACGCTTAACAGCCGGCATAGTTTCAATGGCATTAAAGAGATAAT 5867 Query 37426 ttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAA 37485 | || | ||| | |||||| |||||||||| | |||||||||||||||||| | Sbjct 5868 CACGCTGCTCGCGATCCTTAATATAACTATCAATTAGAATACTATACATTTCAGAGTGTA 5927 Query 37486 TATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGT 37545 |||||| || || || || || ||||| ||||| | || || | | ||| || || | Sbjct 5928 CATTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGTGCCTCTGTAACTTGTACTTCTT 5987 Query 37546 TAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAA 37605 | || | | | | | |||||||| || || ||||| ||| ||||||||||| | Sbjct 5988 GGGAGAAGCGTTCAACAAGATTTTCATTGACAATGCCATCGGAAGCAGCAAAGAAAGCTA 6047 Query 37606 GAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCAATCATTAATATCTT 37665 |||||| | || ||||| | ||||| | | | | ||| ||| || | | |||| Sbjct 6048 GAACATGTGAAATGAAATGACGTTCATTGTCGGTGAGTCTTTCCCAGTCGGAATTGTCTT 6107 Query 37666 TTGATAAATCAACTTCATCAACGGTCCAAAAA 37697 | || | ||| ||||| || || ||||||||| Sbjct 6108 TGGAAAGATCCACTTCTTCTACAGTCCAAAAA 6139 >seq14616 Length=5376 Score = 102 bits (112), Expect = 1e-16 Identities = 85/104 (82%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 153288 GGTGTTTTACATACAAAATTTTGGATAGTTGATAATAAACATGTATATATAGGAAGTGCT 153347 |||||||||||||||||||||||||| ||||| ||||| | ||| | || ||||| Sbjct 1444 GGTGTTTTACATACAAAATTTTGGATTTCCGATAACAAACACATTTATTTGGGCAGTGCC 1385 Query 153348 AATATGGATTGGAGATCACTAACTCAAGTAAAAGAATTAGGTAT 153391 |||||||| |||||||| |||| || || |||||||| ||||| Sbjct 1384 AATATGGACTGGAGATCTTTAACACAGGTTAAAGAATTGGGTAT 1341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 591635080383000