Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq82145 174 1e-38 seq10922 150 1e-31 seq43370 134 1e-26 seq10127 132 4e-26 >seq82145 Length=1636 Score = 174 bits (192), Expect = 1e-38 Identities = 170/219 (78%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 101252 AAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTG 101311 ||||| || || || |||||||| ||||||||||| || ||||| |||| | ||| | | Sbjct 1616 AAACGCAATACCAAGTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCGGATAAAGTGCGG 1557 Query 101312 GCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCT 101371 |||| ||||| |||||||| || || ||||||||||||||||| || ||||| |||||| Sbjct 1556 CCATCTTCCAACTGCTTACCAGCGAAAATCAAACGCTGTTGATCTGGGGGAATACCTTCT 1497 Query 101372 TTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTG 101431 || ||||| ||||| ||| ||| |||||| ||| || || | ||| || || | || Sbjct 1496 TTGTCTTGGATTTTAGCTTTAACATTTTCTATAGTATCCGAAGGTTCAACCTCTAATGTA 1437 Query 101432 ACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 | ||||| || ||||| ||||| || || || |||||| Sbjct 1436 ATTGTTTTACCCGTTAATGTTTTAACGAAAATTTGCATG 1398 Score = 156 bits (172), Expect = 3e-33 Identities = 166/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 101252 AAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTG 101311 |||||||| || ||||| | |||||||||||||||||||| ||||| | | || | Sbjct 1388 AAACGTAATACCAAATGCAATGTAGATTCTTTTTGTATATTATAATCAGACAATGTGCGC 1329 Query 101312 GCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCT 101371 | || |||||||| || || ||||| |||||||| |||||||| || || || ||||| Sbjct 1328 CCGTCTTCCAATTGTTTGCCAGCAAAAATCAAACGTTGTTGATCTGGTGGGATTCCTTCC 1269 Query 101372 TTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTG 101431 || ||||||||||| ||| ||| |||| | ||| || || | || || || | |||| Sbjct 1268 TTGTCTTGAATTTTAGCTTTAACATTTTCAATAGTATCGGAAGGCTCAACCTCCAAAGTG 1209 Query 101432 ACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 | |||||||| || || || || ||||| || |||||| Sbjct 1208 ATGGTTTTGCCAGTCAATGTCTTAACAAAGATTTGCATG 1170 >seq10922 Length=8781 Score = 150 bits (166), Expect = 1e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| || ||||| || || | ||||| |||| ||||||||||| | || || | | Sbjct 3018 ACGCAATACTAAGTGCAGAATGGATTCCTTTTCAATATTGTAATCCGAGAGGGTACGACC 3077 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| |||||||| || || || || |||||||| |||||||| || ||||| |||||||| Sbjct 3078 ATCTTCCAATTGTTTTCCAGCGAAAATCAAACGTTGTTGATCTGGTGGAATTCCTTCTTT 3137 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 || ||||| || ||| ||| |||| | |||||| |||| || || |||||||| | Sbjct 3138 GTCCTGAATCTTGGCTTTGACATTTTCAATAGTGTCCGACGGCTCGACCTCAAGAGTAAT 3197 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || |||| ||||| ||||| |||||||| Sbjct 3198 GGTCTTACCCGTTAGGGTTTTGACAAAAATCTGCAT 3233 >seq43370 Length=3724 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || ||||| | || ||||| ||||| || ||||| |||| | || | |||| ||| Sbjct 2570 ACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGACCATCTTCC 2511 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 ||||| ||||| || || |||||||| |||||||| || || || |||||||| ||||| Sbjct 2510 AATTGTTTACCAGCGAAGATCAAACGTTGTTGATCTGGGGGGATACCTTCTTTGTCTTGG 2451 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 ||||| || ||| |||| | ||||| || | || ||||| | || | ||||| Sbjct 2450 ATTTTGGCCTTGACATTTTCAATGGTGTCGGAAGGCTCGACTTCCAAGGTAATGGTTTTA 2391 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || ||||||||||| || || |||||||| Sbjct 2390 CCAGTTAAAGTTTTGACGAAGATCTGCAT 2362 >seq10127 Length=8452 Score = 132 bits (146), Expect = 4e-26 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 101252 AAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTG 101311 ||||| || |||||||| ||||| ||||| || || || ||||| || | | || | Sbjct 7143 AAACGCAATACTAAATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGT 7202 Query 101312 GCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCT 101371 |||| |||||||| || || || || |||||||| || ||||| || ||||| ||||| Sbjct 7203 CCATCTTCCAATTGTTTGCCGGCGAAGATCAAACGTTGCTGATCTGGGGGAATACCTTCC 7262 Query 101372 TTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTG 101431 ||||| || ||||| || || | || | || || || | ||| ||||| | ||| Sbjct 7263 TTATCCTGGATTTTAGCCTTCACGTTCTCAATGGTATCGGAAGGTTCAACTTCCAAGGTG 7322 Query 101432 ACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 | ||||||||||| || ||||| || || |||||||| Sbjct 7323 ATAGTTTTGCCGGTCAAGGTTTTAACGAAAATCTGCAT 7360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395833710620775