Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq74052 141 2e-28 >seq74052 Length=11856 Score = 141 bits (156), Expect = 2e-28 Identities = 324/484 (67%), Gaps = 4/484 (1%) Strand=Plus/Plus Query 48176 TTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAA 48235 |||||||| ||||||||||| | || | | || |||||||| || | || ||| Sbjct 5663 TTGGAGAATGTAAGACCAGGCATAAGACCACGTTTCTTTAGCCAGAAGATGGAGGCAAAA 5722 Query 48236 GAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAA 48295 |||| |||||| || |||||||| || || || || | | | || || ||| | Sbjct 5723 CTGCCACTGAAGAAAATACCCTCCACAGCAGCAAAAGCAATAATACGTTCACCAAAATTA 5782 Query 48296 GCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATC 48355 || || || ||||| | | ||||| || ||||| ||| | ||||| Sbjct 5783 GCCGATTTCGAGGAAATCCAAGCCATAGCCCAATCAGCCTTACGCTTAACAGCCGGCATA 5842 Query 48356 GTCTCTATGGCCCGGAAGAGCTTCTTGCACTCACCT-GCG-TCCGCAACATAGGTAGTGA 48413 || || ||||| ||||| | | ||| | || ||| ||| || ||| || | Sbjct 5843 GTTTCAATGGCATTAAAGAGATAAT--CACGCTGCTCGCGATCCTTAATATAACTATCAA 5900 Query 48414 GCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGG 48473 || | ||||| |||||||| ||||| || || || || ||||| || ||||| Sbjct 5901 TTAGAATACTATACATTTCAGAGTGTACATTTTCCATGGCAATTTGGAAGCCATAGAAAC 5960 Query 48474 CCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTA 48533 | ||||| || || |||||| |||||| | || | ||||| |||||||| | Sbjct 5961 AGCGTGCCTCTGTAACTTGTACTTCTTGGGAGAAGCGTTCAACAAGATTTTCATTGACAA 6020 Query 48534 TCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGG 48593 | ||||| |||||||||||||| || || |||||| || |||||| || || |||| || Sbjct 6021 TGCCATCGGAAGCAGCAAAGAAAGCTAGAACATGTGAAATGAAATGACGTTCATTGTCGG 6080 Query 48594 TGAGAGCATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGG 48653 |||| | |||| | ||||||| || ||||||||||| |||||||| || | Sbjct 6081 TGAGTCTTTCCCAGTCGGAATTGTCTTTGGAAAGATCCACTTCTTCTACAGTCCAAAAAG 6140 Query 48654 ACGC 48657 | || Sbjct 6141 AAGC 6144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 930460663968000