Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq9860 122 4e-23 >seq9860 Length=13996 Score = 122 bits (134), Expect = 4e-23 Identities = 318/485 (66%), Gaps = 0/485 (0%) Strand=Plus/Plus Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965 ||| ||| |||||| || || | |||||| || || || ||||||| ||||| || Sbjct 10205 CCAGTCACCATTTTCTTCCACACGTTTCATAAACAAGTCGGGTATCCACAAAGCATAGAA 10264 Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAA 26025 | |||||| ||||| ||||| || ||| || || |||| ||| || || ||||| Sbjct 10265 AAGATCTCTGGCTCTGTGCTCTTCCTTGCCGGTGTTTTTCTTTAAATCCAAAAATTCAAA 10324 Query 26026 AATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACC 26085 ||||||||| ||||| || || ||||| |||||||| ||| | ||| || ||||| Sbjct 10325 AATATCTGAATGCCAAGGCTCCAAATAAATAGCAAAGGCACCAGGGCGTTTGCCACCACC 10384 Query 26086 TTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGA 26145 ||||| || || | || | || || || | | |||||| || | ||| |||| Sbjct 10385 CTGATCAACATAACGGGCCACATTGTTAAACACCCTAAGCATTGGTACCAGACCATTTGA 10444 Query 26146 AAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACC 26205 ||||| |||| | ||| | || | | |||||| ||| ||| || || Sbjct 10445 GGTGCCGTTAGTGCCGTCAATGGAAGTGCCCTTAGCTCTAATGCAGTGCACATTTATGCC 10504 Query 26206 GATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTGTATCGAAAATTCCTTT 26265 || ||||| || |||| ||||| ||||| | | |||| | |||||| || | Sbjct 10505 AATACCACCCGCTGATTTGGAAATCATGGCACATTGTTCCACTGACTTGAAAATACCCTC 10564 Query 26266 TATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCC 26325 || ||| | ||| || || || || || || || |||| | | || | Sbjct 10565 AATAGAATCGGCCACCATGGTCAACAAGAAGCATGACGACAACTGCGGTCTATTGGTAGC 10624 Query 26326 TGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCTTCACTCAAAGCTGTATAAGT 26385 | ||| ||||| |||| |||||||||| |||| | ||| ||| ||||||| Sbjct 10625 GGCCGCAAACAATGTAGGTGAAGCATGAGTAAAATAACGCTCAGACAACAAATTATAAGT 10684 Query 26386 TTCAA 26390 ||||| Sbjct 10685 TTCAA 10689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252756047605625