Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq9995 96.9 4e-15 >seq9995 Length=10819 Score = 96.9 bits (106), Expect = 4e-15 Identities = 171/245 (70%), Gaps = 6/245 (2%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || ||||| ||||| | || ||||| ||||| || |||||||||||||| || || || Sbjct 5634 ACTCCAATTGGACCCATTCCTGGACCACCACCACCGTGTGGAATACAGAAAGTTTTGTGC 5575 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | ||||| ||| | ||||| ||||| |||| || ||||| || || ||| Sbjct 5574 AGATTTAAATGGGAAACATCACTTCCATAATCACCGGGGCGACAAAGACCCACTTGGGCA 5515 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTC-ATGAACGA--TCTTACAT 138359 || | ||| || ||||| | ||| || || || ||| |||| ||||| | || | || Sbjct 5514 TTCATATTGGCGCCATCTAAATACACTTGGCCCCCA-TGTCTATGAATTAATTCGCAAAT 5456 Query 138360 ATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACAT 138419 || | | | | || ||| ||||| || ||| || |||||||| ||||||| ||| Sbjct 5455 GTCGGCC--ACGGTTTCTTCGAATACGCCCATAGTTGAGGGATATGTGATCATAAGGCAT 5398 Query 138420 GAGAG 138424 || || Sbjct 5397 GATAG 5393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578332009029000