Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq82145 161 2e-34 seq10922 129 1e-24 >seq82145 Length=1636 Score = 161 bits (178), Expect = 2e-34 Identities = 178/237 (75%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || ||||| | ||| || | ||||| ||||||||||| ||||| ||||| Sbjct 1407 AATTTGCATGCCACCACGCAAACGTAATACCAAATGCAATGTAGATTCTTTTTGTATATT 1348 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || || || || | || || |||||||| || |||||||| || | ||||| Sbjct 1347 ATAATCAGACAATGTGCGCCCGTCTTCCAATTGTTTGCCAGCAAAAATCAAACGTTGTTG 1288 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| || || |||||||| || ||||| ||||| | ||| | |||| |||||||||||| Sbjct 1287 ATCTGGTGGGATTCCTTCCTTGTCTTGAATTTTAGCTTTAACATTTTCAATAGTATCGGA 1228 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || |||||| || | ||| || ||||| || || | || || ||||| |||||||| Sbjct 1227 AGGCTCAACCTCCAAAGTGATGGTTTTGCCAGTCAATGTCTTAACAAAGATTTGCAT 1171 Score = 141 bits (156), Expect = 2e-28 Identities = 173/236 (73%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||| | ||| || | ||||| || | || | ||||| ||| || Sbjct 1634 ATTTGCATACCACCACGCAAACGCAATACCAAGTGAAGGGTGGATTCTTTTTGAATGTTG 1575 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||||||||| || | ||| || || || || || || ||||| || | ||||||| Sbjct 1574 TAGTCGGATAAAGTGCGGCCATCTTCCAACTGCTTACCAGCGAAAATCAAACGCTGTTGA 1515 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || || |||||||| ||||| ||||| | ||| | |||| |||||||| ||| Sbjct 1514 TCTGGGGGAATACCTTCTTTGTCTTGGATTTTAGCTTTAACATTTTCTATAGTATCCGAA 1455 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | ||||| |||| || || |||||||| |||| ||||| || || |||||||| Sbjct 1454 GGTTCAACCTCTAATGTAATTGTTTTACCCGTTAATGTTTTAACGAAAATTTGCAT 1399 >seq10922 Length=8781 Score = 129 bits (142), Expect = 1e-24 Identities = 139/184 (76%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237 |||||| || || || | || | | ||| || ||||||||||| || ||||| || | Sbjct 3051 AATATTGTAATCCGAGAGGGTACGACCATCTTCCAATTGTTTTCCAGCGAAAATCAAACG 3110 Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297 |||||||| || || ||||||||||| || || || |||| ||| | |||| |||||| Sbjct 3111 TTGTTGATCTGGTGGAATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATTTTCAATAGT 3170 Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTG 193357 || || | ||| || || ||||| || || ||||| ||||| ||||| ||||| || || Sbjct 3171 GTCCGACGGCTCGACCTCAAGAGTAATGGTCTTACCCGTTAGGGTTTTGACAAAAATCTG 3230 Query 193358 CATT 193361 |||| Sbjct 3231 CATT 3234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 898618954014000