Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq9860 223 3e-53 seq43370 149 6e-31 seq82145 143 2e-29 seq10922 140 3e-28 seq10127 129 5e-25 >seq9860 Length=13996 Score = 223 bits (246), Expect = 3e-53 Identities = 1038/1632 (64%), Gaps = 47/1632 (3%) Strand=Plus/Plus Query 138310 ATGAAAGCGCCTCGATCAATGGCCATGTTAATTAAATTTTTACTTTTCATCTCCCACACG 138369 ||||||||||| ||||| |||||| | || | ||| |||||||| || Sbjct 9144 ATGAAAGCGCCACGATCGGCGGCCATTTGTATGGTGGTCTTAACGGAAATCTCCCAAACT 9203 Query 138370 GTCTTGTATAGATCACGAATATGTCGCGGTATTGTTGCAATATTTTGAATGCTCCCG--- 138426 ||||||||||||||||| |||||| || ||| | | || ||| ||| ||| Sbjct 9204 GTCTTGTATAGATCACGTATATGTTTGGGAATTTCTTCTATGGCTTGTATGGAGCCGCGA 9263 Query 138427 TTGGCCGCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAACTT-GATCAAGTC 138485 |||| ||| || |||| |||| ||||| | | | || ||| || | | || || Sbjct 9264 TTGGA---AATAATTTTATTTTTCATTTCATCATCCCATAAAT-CAAGTTCGGTTAAATC 9319 Query 138486 GTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAAT 138545 || | || || || | || | ||||| || | ||| || || | | |||||| Sbjct 9320 TTTAAGCAAATGATGATTGACAACATTGAATTCTCCCGACAAAACACGTCTAGTGTAAAT 9379 Query 138546 GTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGT 138605 ||| |||| | || ||||| ||||| ||||| || ||||| || || || | || || Sbjct 9380 ATTGGAGGTGTACGGTTCAAAGGATTCATTGTTGCCTAGAATTTGTGCGGTCGAAGCTGT 9439 Query 138606 CGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAG 138665 |||||| || | | | |||||| |||| ||| || |||||||| ||||| | Sbjct 9440 GGGCATGGGGGCTAATAGCAAAGAATTGCGTACACCATGTTGCTTGATTTTCTCCTTCAA 9499 Query 138666 CGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCC 138725 | ||||||| |||||| || | ||| |||| |||||||||||||| |||| || || Sbjct 9500 CTCTGACCAGTTCCACAAGTCTGTGGGTGTTTTATTCCACATATCGTATTGTAGTATACC 9559 Query 138726 CAAACTTGCGGGACTGCCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTT 138785 | |||| | |||| ||| || | || ||| ||| | || ||||| || Sbjct 9560 CTTACTTACTGGACAGCCGGGATAAGTTTCATATGTGCCATCTTTTTCGGCCAATTCACA 9619 Query 138786 GCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGC 138845 || || || | || ||||| |||||||||||| |||||| ||||| | ||| || Sbjct 9620 ACTAGCTTCCAATGCGCCATAATAAATAGTTTCGAAAATCTGTTGATTTAACAAAAACGC 9679 Query 138846 CTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCC 138905 || | ||||| || || || | | | || | ||||| | || || || || Sbjct 9680 CTTTTCACTCTCATAGGGGTAACGCATTAAAATCAAAGTATCGGCAAAACCCTGAACACC 9739 Query 138906 CACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCGGCTTC---GATAGGATAATA 138962 | || | ||| ||||| |||| ||| || ||| || || | |||||||| Sbjct 9740 TATGCCAATAGGACGATGACGCATATTGGA---TTTCCTAGCCTCAGGCAAGGGATAATA 9796 Query 138963 GTTTACATCGATGATTTTGTTTAAAT--TTCGCACGACCACCTTAGTCGTATGCTTTAAT 139020 ||| | |||||||||||||| | || || | | | || ||||| || || ||| Sbjct 9797 GTTAATGTCGATGATTTTGTTGAGATTCTTGGTA--ATGACTTTAGTGACATTTTTCAAT 9854 Query 139021 CGTTCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAA 139080 || |||||| | || | || | || || |||||| | || | Sbjct 9855 TTTTTAAAATCAAAGGT----CTTTTCTGGT-------GT-GACAAACATATTAAGGGCT 9902 Query 139081 ATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCA 139140 || ||||| | || || || || | || || ||| | ||||| ||||| || | Sbjct 9903 ATGGAGGCCAAATTACAAACGGCTATCTCATCAGGGGCAGAATATTCTACAATCTCTGTG 9962 Query 139141 CACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCA 139200 ||||| || || ||||| || || || | |||||| || || ||||| ||||| || ||| Sbjct 9963 CACAAGTTGCTGCACTTAATGGTGCCAATATTTTGCTGGTTACTTTTGCGGTTGCAGGCA 10022 Query 139201 TCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAAT-GAATTTGAA 139259 ||||| || | |||||| || || || ||||| ||||| | || || || | | || Sbjct 10023 TCTTTATACAACATATAGGGAGTACCGGTTTCTACTTGGGCTTCAATTATAGCA----AA 10078 Query 139260 C--AAGTCCCT-AG-CTTG--TATTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTC 139313 | ||| ||| || |||| | || | | | ||| | || ||||| Sbjct 10079 CCAAAGAGCCTGAGCCTTGACAGTGCGATTGGCCTTACCTTCTT---TTTCATACTTGGT 10135 Query 139314 GTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACA 139373 || | ||| |||||| ||||| | | || ||| || |||| |||| |||||| Sbjct 10136 ATACAATTCTTCGAATTCCTCACCCCAAACATCCTGCAGACCGGGACATTTGTGAGGACA 10195 Query 139374 CATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAA 139433 ||| || ||||| | || || | | || || |||| |||| || || |||||||| Sbjct 10196 CATTAGGGACCAGTCACCATTTTCTTCCACACGTTTCATAAACAAGTCGGGTATCCACAA 10255 Query 139434 AGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTCATGTTAAG 139493 ||| | | | ||| | || | | |||||| || |||| || | | | Sbjct 10256 AGCATAGAAAAGATCTCTGGCTCTGTGCTCTTCCTTGCCGGTGTTTTTCTTTAAATCCAA 10315 Query 139494 GAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTT 139553 || ||||||| || | ||||| || |||| ||| || || | || || ||||| Sbjct 10316 AAATTCAAAAATATCTGAATGCCAAGGCTCCAAATAAATAGCAAAGGCACCAGGGCGTTT 10375 Query 139554 G---CCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAG 139610 | ||||| ||||| || | || | |||| || || || | | ||| || |||| Sbjct 10376 GCCACCACCCTGATCAACATAACGGGCCACATTGTTAAACACCCTAAGCATTGGTACCAG 10435 Query 139611 ACCGCTCGCTGTTCCGTTGGTGCTACGGATGGGACTGTTGCGAGCTCGGACGTCATGTAC 139670 ||| | | || ||||| |||| |||| | || ||||| | | || || Sbjct 10436 ACCATTTGAGGTGCCGTTAGTGCCGTCAATGGAAGTGCCCTTAGCTCTAATGCAGTGCAC 10495 Query 139671 ATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAATCGCGTAATGTCTCGTA 139730 ||| ||||| || || || | ||||||| || | | || | | || || | | Sbjct 10496 ATTTATGCCAATACCACCCGCTGATTTGGAAATCATGGCACATTGTTCCACTGACTTGAA 10555 Query 139731 TATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAG 139790 ||||| || ||| || ||| || | || ||||||||||| | |||||| Sbjct 10556 AATACCCTCAATAGAATCGGCCACCATGGTCAACAAGAAGCATGACGACAACTGCGGTCT 10615 Query 139791 TTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAA 139850 || || |||| ||||||| ||||| || || || || | | |||| ||| Sbjct 10616 ATTGGTAGCGGCCGCAAACAATGTAGGTGAAGCATGAGTAAAATAACGCTCAGACAACAA 10675 Query 139851 TTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCAT 139910 | || ||||| || || ||||||| ||| || ||||| | || |||| ||| Sbjct 10676 ATTATAAGTTTCAATAGCCGAATCAATATCATCTCCATGTATACCTATAGCTACTCTCAT 10735 Query 139911 CAGCATATGTTG 139922 | |||||| || Sbjct 10736 TAACATATGCTG 10747 Score = 116 bits (128), Expect = 3e-21 Identities = 130/174 (75%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 138153 TTTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCC 138212 ||||||||| ||||| | || |||| || ||||| || ||||||| ||||||||| || Sbjct 8922 TTTATCTACGGTAAATTGAATAGCATTGGCTGCTGGCTTTGTTCTCAAATAATACATGCC 8981 Query 138213 CGTTTTTAACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGTCGG 138272 || ||||| || || |||||| || | ||||| || || | | ||||| | || Sbjct 8982 GGTCTTTAAGCCTGATTTCCAGGCATAGAAATGTATGGAGGTCAATTTGCCGTAATTTGG 9041 Query 138273 TTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATC 138326 | |||| | ||| || ||||||||||| ||||| ||||||||||| ||||| Sbjct 9042 CTCGGCCACATGTATATTGAACGATTGACTTTGATCTATGAAAGCGCCACGATC 9095 >seq43370 Length=3724 Score = 149 bits (164), Expect = 6e-31 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | ||||| |||| |||||||| ||||| | ||||| || | | Sbjct 2361 GATGCAGATCTTCGTCAAAACTTTAACTGGTAAAACCATTACCTTGGAAGTCGAGCCTTC 2420 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | |||| || || || ||||||||||||||||| || || || ||||| Sbjct 2421 CGACACCATTGAAAATGTCAAGGCCAAAATCCAAGACAAAGAAGGTATCCCCCCAGATCA 2480 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||||||||||||||| || || ||||| |||| ||| | | | |||| || || || Sbjct 2481 ACAACGTTTGATCTTCGCTGGTAAACAATTGGAAGATGGTCGCACCTTGTCCGACTACAA 2540 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912 ||| ||||||||||| || |||| ||||| Sbjct 2541 CATCCAAAAGGAATCCACTTTACATTTGGT 2570 >seq82145 Length=1636 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || ||||||| |||| |||||||| ||||| | || || ||| | | Sbjct 1399 ATGCAAATTTTCGTTAAAACATTAACGGGTAAAACAATTACATTAGAGGTTGAACCTTCG 1458 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || |||||| || ||| || ||||||||||||||||| || || || |||||| Sbjct 1459 GATACTATAGAAAATGTTAAAGCTAAAATCCAAGACAAAGAAGGTATTCCCCCAGATCAA 1518 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || |||||||| || || || || ||| |||| ||| | | | || || || ||| Sbjct 1519 CAGCGTTTGATTTTCGCTGGTAAGCAGTTGGAAGATGGCCGCACTTTATCCGACTACAAC 1578 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||| ||||| || || |||||||| ||||| ||||| || || Sbjct 1579 ATTCAAAAAGAATCCACCCTTCACTTGGTATTGCGTTTGCGTGGTGG 1625 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| |||| || | || || ||||| || || | || || || | || Sbjct 1171 ATGCAAATCTTTGTTAAGACATTGACTGGCAAAACCATCACTTTGGAGGTTGAGCCTTCC 1230 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| || ||| || || |||||||| |||||||| || || |||||| Sbjct 1231 GATACTATTGAAAATGTTAAAGCTAAAATTCAAGACAAGGAAGGAATCCCACCAGATCAA 1290 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||||||||| ||||| || ||||| |||| || | | | |||| |||||||| Sbjct 1291 CAACGTTTGATTTTTGCTGGCAAACAATTGGAAGACGGGCGCACATTGTCTGATTATAAT 1350 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || ||||| ||||| ||| | || ||||| || || ||||| || ||| Sbjct 1351 ATACAAAAAGAATCTACATTGCATTTGGTATTACGTTTGCGTGGTGGC 1398 >seq10922 Length=8781 Score = 140 bits (154), Expect = 3e-28 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | ||||| ||||| ||||| || ||||| || || || || | | Sbjct 3233 ATGCAGATTTTTGTCAAAACCCTAACGGGTAAGACCATTACTCTTGAGGTCGAGCCGTCG 3174 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || ||| ||||| || |||||||||||||| || || |||||| Sbjct 3173 GACACTATTGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCACCAGATCAA 3114 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||||||||| || || || ||||| |||| ||| | | | | || ||||| || Sbjct 3113 CAACGTTTGATTTTCGCTGGAAAACAATTGGAAGATGGTCGTACCCTCTCGGATTACAAT 3054 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 ||| |||||||||| | || ||||| || ||||| Sbjct 3053 ATTGAAAAGGAATCCATTCTGCACTTAGTATTGCG 3019 >seq10127 Length=8452 Score = 129 bits (142), Expect = 5e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || | ||||||||||| || || | ||||| || | | Sbjct 7132 ATGCAAATCTTCGTAAAGACCTTGACCGGTAAAACCATCACCTTGGAAGTCGAGCCTTCG 7073 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || |||||||| || || ||||| || ||||| ||||| Sbjct 7072 GACACTATTGAAAACGTCAAGGCTAAGATCCAGGATAAGGAAGGTATTCCTCCAGATCAG 7013 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||||||||||||||||| ||||| |||| ||| | | |||| || || ||| Sbjct 7012 CAACGTTTGATCTTTGCCGGCAAACAATTGGAAGATGGTCGCACTTTGTCTGACTACAAC 6953 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932 || |||||||| || || || || |||||| | || | || ||||||| Sbjct 6952 ATCCAAAAGGAGTCCACCCTCCATTTGGTGCTACGTCTTCGTGGAGGCG 6904 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || ||||||| | ||||| |||||||| || | ||||| ||| | || Sbjct 7360 ATGCAGATTTTCGTTAAAACCTTGACCGGCAAAACTATCACCTTGGAAGTTGAACCTTCC 7301 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || |||| || | ||| ||||| || || ||||| || || || ||||| Sbjct 7300 GATACCATTGAGAACGTGAAGGCTAAA-ATCCAGGATAAGGAAGGTATTCCCCCAGATCA 7242 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||||||||||||| ||||| ||||| |||| ||| | | | | || || || || Sbjct 7241 GCAACGTTTGATCTTCGCCGGCAAACAATTGGAAGATGGACGCACCCTTTCTGACTACAA 7182 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || |||||||| || || || || || ||||| ||||| || || Sbjct 7181 CATCCAGAAGGAATCCACCCTCCATTTAGTATTGCGTTTGCGTGGTGG 7134 Score = 109 bits (120), Expect = 5e-19 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 24791 ATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAG 24850 |||||||| || ||||| || ||||| || ||||||||| |||||||||| || ||||| Sbjct 7819 ATCCAAGATAAGGAAGGTATTCCTCCAGACCAACAACGTCTGATCTTTGCTGGTAAACAA 7760 Query 24851 CTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTG 24910 |||| ||| | | | | || || || ||||| ||||||||||| || || |||||| Sbjct 7759 TTGGAAGATGGCCGCACCCTTTCGGACTACAACATCCAAAAGGAATCTACTCTCCACTTG 7700 Query 24911 GTGTTGCGATTGCGCGGAGG 24930 || ||||| || || || || Sbjct 7699 GTTTTGCGTTTACGTGGTGG 7680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449379795981000