Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq10127 91.5 1e-13 seq82145 89.7 5e-13 >seq10127 Length=8452 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | |||||| || ||||| || ||||| || | ||| | | | || || | Sbjct 7155 AAATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGTCCA-TCTTCCAA 7213 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 || ||||| ||| | || | || ||||| || || || || |||||||| || ||| Sbjct 7214 TTGTTTGCCGGCGAAGATCAAACGTTGCTGATCTGGGGGAATACCTTCCTTATCCTGGAT 7273 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 || ||| | | ||||| || |||| || || || || | ||||| |||||||| Sbjct 7274 TTTAGCCTTCACGTTCTCAATGGTATCGGAAGGTTCAACTTCCAAGGTGATAGTTTTGCC 7333 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| ||||| |||||||||||||| Sbjct 7334 GGTCAAGGTTTTAACGAAAATCTGCAT 7360 >seq82145 Length=1636 Score = 89.7 bits (98), Expect = 5e-13 Identities = 146/208 (70%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | || || ||||| |||||||| ||||| || ||| | ||| || | Sbjct 1376 AAATGCAATGTAGATTCTTTTTGTATATTATAATCAGACAATGTGCGCCCGTCTTCCAAT 1317 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 || ||||| || |||| | || || || || || ||||| ||||||||||| ||| Sbjct 1316 TGTTTGCCAGCAAAAATCAAACGTTGTTGATCTGGTGGGATTCCTTCCTTGTC-TTGAAT 1258 Query 133575 TTTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| |||| | | | |||| || |||| ||||| || || | |||| ||||||||| Sbjct 1257 TTTAGCTTTAACATTTTCAATAGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTTTGCC 1198 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 |||| || || || || || |||||| Sbjct 1197 AGTCAATGTCTTAACAAAGATTTGCATG 1170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482864412873000