Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq82145 93.3 1e-13 seq10127 89.7 1e-12 seq43370 86.0 1e-11 >seq82145 Length=1636 Score = 93.3 bits (102), Expect = 1e-13 Identities = 145/202 (72%), Gaps = 8/202 (4%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || || ||||| || || || || || ||| ||| || || | ||| Sbjct 1414 AAAACATTAACGGGTAAAACAATTACATTAGAGGTTGAACCTTCGGATACTATAGAAAAT 1473 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA-AGACTT--AT 206300 || ||||| ||| || ||||| |||||||| ||| || || |||| || || || Sbjct 1474 GTTAAAGCTAAA-ATCCAAGACAAAGAAGGTATTCCCCCAGA---TCAACAGCGTTTGAT 1529 Query 206301 CTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGA 206360 ||||| || ||||||||||||||||| | ||||| |||| |||||| | || ||||| Sbjct 1530 TTTCGCTGGTAAGCAGTTGGAAGATGGCCGCACTTTATCCGACTACAACATTCAAAAAGA 1589 Query 206361 GTCTACTCTTCACCTTGTTTTG 206382 || || |||||| | || ||| Sbjct 1590 ATCCACCCTTCACTTGGTATTG 1611 >seq10127 Length=8452 Score = 89.7 bits (98), Expect = 1e-12 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || ||||| ||||| |||||||| || ||| ||||| | ||| || ||| Sbjct 7108 ACCGGTAAAACCATCACCTTGGAAGTCGAGCCTTCGGACACTATTGAAAACGTCAAGGCT 7049 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| || || || ||||| ||| || || ||| | | ||||| ||||| || Sbjct 7048 AAGATCCAGGATAAGGAAGGTATTCCTCCAGATCAGCAACGTTTGATCTTTGCCGGCAAA 6989 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 || ||||||||||| | |||||| | || |||||| |||| || ||||| || || || Sbjct 6988 CAATTGGAAGATGGTCGCACTTTGTCTGACTACAACATCCAAAAGGAGTCCACCCTCCA 6930 >seq43370 Length=3724 Score = 86.0 bits (94), Expect = 1e-11 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| | || || ||||| || || |||||||| || ||| ||| Sbjct 2365 CAGATCTTCGTCAAAACTTTAACTGGTAAAACCATTACCTTGGAAGTCGAGCCTTCCGAC 2424 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | ||| || ||| || || ||||| |||||||| || || || ||| Sbjct 2425 ACCATTGAAAATGTCAAGGCCAAAATCCAAGACAAAGAAGGTATCCCCCCAGATCAACAA 2484 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | |||||||| || || || ||||||||||| | || ||| |||| |||||| || Sbjct 2485 CGTTTGATCTTCGCTGGTAAACAATTGGAAGATGGTCGCACCTTGTCCGACTACAACATC 2544 Query 206353 CAGAAAGAGTCTACT 206367 || || || || ||| Sbjct 2545 CAAAAGGAATCCACT 2559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1180426593076075