Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq82145 98.7 9e-16 seq43370 98.7 9e-16 >seq82145 Length=1636 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| || | ||| ||||| || | || || |||||||||||||| |||| Sbjct 1625 CCACCACGCAAACGCAATACCAAGTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCGGAT 1566 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || |||| ||||||||| || || ||||| ||||| || || | ||| Sbjct 1565 AAAGTGCGGCCATCTTCCAACTGCTTACCAGCGAAAATCAAACGCTGTTGATCTGGGGGA 1506 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688 | | || ||||| ||| ||| || || | | || | | || || | ||| || Sbjct 1505 ATACCTTCTTTGTCTTGGAT-TTTAGCTTTAACATTTTCTATAGTATCCGAAGGTTCAAC 1447 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | || || ||||||||||| || ||||| || || || ||||| Sbjct 1446 CTCTAATGTAATTGTTTTACCCGTTAATGTTTTAACGAAAATTTGCAT 1399 >seq43370 Length=3724 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||||||||| || |||||||| |||||||| |||| | Sbjct 2588 CCACCACGAAGACGGAGTACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 2529 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 ||||| || | || |||| || ||||| || || ||||| || || || || | || Sbjct 2528 AAGGTGCGACCATCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGTTGATCTGGGGGG 2469 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | || ||||| ||| || ||| | | || | | |||||| | || || Sbjct 2468 ATACCTTCTTTGTCTTGGATTTTGGCCTTGACATTTTCAATGGTGTCGGAAGGCTCGACT 2409 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| || || |||||||| || |||||||| || || |||||||| Sbjct 2408 TCCAAGGTAATGGTTTTACCAGTTAAAGTTTTGACGAAGATCTGCAT 2362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450274764741000