Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq70009 116 4e-21 >seq70009 Length=3032 Score = 116 bits (128), Expect = 4e-21 Identities = 186/267 (70%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 117304 AGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTG 117363 ||||||||| ||||||| ||| ||| ||| ||||| || | | ||| ||||||||||| Sbjct 2377 AGTGAAAATATAACGAGCGCTGGCACAATCTTTGCCGCCCGTTAAACGTGTACCGAATTG 2436 Query 117364 TCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGAC 117423 || || ||||| | ||| || | || || | ||||||| |||| || ||||| || || Sbjct 2437 ACCTCTAGGCTCTAGGAGATTAATATTATTCGAGCCCACATAGTTCTGGGCCAAATTAAC 2496 Query 117424 AATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCC 117483 ||| || ||| || ||||||| || || || || | | || ||||| | || Sbjct 2497 AATGGTCATTTGTAGTGATACCTCACCGTGATGGTAAGCGGACATTTCAGCCACCGAACC 2556 Query 117484 CGCCAGCTGAGCCACCTTCATGTCTGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCAC 117543 | ||| ||||||||||| | ||| | | || || | ||||| | || || Sbjct 2557 TGACAGTTGAGCCACCTTAACTTCTCTCTTATCATTACGTTTAAAGCAGGTGAACATGAC 2616 Query 117544 CTTGCGCTGACTTGGCTTCAGACCATC 117570 ||| || |||| |||||| | |||||| Sbjct 2617 CTTACGTTGACCTGGCTTAAAACCATC 2643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546586188585000