Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq10127 120 2e-22 seq10922 98.7 6e-16 >seq10127 Length=8452 Score = 120 bits (132), Expect = 2e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 34478 CGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG 34537 |||| || | |||||| | |||||||||||| ||| ||||||||| ||||| || || | Sbjct 6904 CGCCTCCACGAAGACGTAGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAG 6963 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 | | || || | ||||| | |||||| |||||||| || ||||| || || || || | Sbjct 6964 ACAAAGTGCGACCATCTTCCAATTGTTTGCCGGCAAAGATCAAACGTTGCTGATCTGGAG 7023 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGTCTTCGCTCTCC 34656 | | || ||||| || |||| || | || ||| | ||| ||||| ||| Sbjct 7024 GAATACCTTCCTTATCCTGGATC-TTAGCCTTGACGTTTTCAATAGTGTCCGAAGGCTCG 7082 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||||| ||| || ||||||||||| || || || || || || ||||| Sbjct 7083 ACTTCCAAGGTGATGGTTTTACCGGTCAAGGTCTTTACGAAGATTTGCAT 7132 Score = 105 bits (116), Expect = 4e-18 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 34491 ACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTC 34550 |||||| || |||||||| ||| ||||| || ||||| || || ||||| || || | Sbjct 7145 ACGCAATACTAAATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGTCC 7204 Query 34551 GTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTT 34610 ||||| | |||||| ||||| || || ||||| || || || || || | || ||||| Sbjct 7205 ATCTTCCAATTGTTTGCCGGCGAAGATCAAACGTTGCTGATCTGGGGGAATACCTTCCTT 7264 Query 34611 GTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTA 34669 || ||| ||| | || ||| | ||| || || || ||||||| ||| | Sbjct 7265 ATCCTGGAT-TTTAGCCTTCACGTTCTCAATGGTATCGGAAGGTTCAACTTCCAAGGTGA 7323 Query 34670 TCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | ||||| ||||| || ||||| || ||||||||||| Sbjct 7324 TAGTTTTGCCGGTCAAGGTTTTAACGAAAATCTGCAT 7360 >seq10922 Length=8781 Score = 98.7 bits (108), Expect = 6e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | ||||||||| || || || ||| || ||||||| ||| || ||||| || Sbjct 3007 CCACCACGAAGACGCAATACTAAGTGCAGAATGGATTCCTTTTCAATATTGTAATCCGAG 3066 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||||| | |||||| || || || || ||||| ||||| || || || Sbjct 3067 AGGGTACGACCATCTTCCAATTGTTTTCCAGCGAAAATCAAACGTTGTTGATCTGGTGGA 3126 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659 | ||| || ||||| ||||| ||| | | ||| ||||| ||| || Sbjct 3127 ATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATTTTCAATAGTGTCCGACGGCTCGACC 3186 Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | || || || ||||| |||| ||||| |||||||||||||| Sbjct 3187 TCAAGAGTAATGGTCTTACCCGTTAGGGTTTTGACAAAAATCTGCAT 3233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314376421753475