Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq8915 111 1e-19 >seq8915 Length=10834 Score = 111 bits (122), Expect = 1e-19 Identities = 199/291 (68%), Gaps = 0/291 (0%) Strand=Plus/Plus Query 118374 AAAATCTTCAAACTTAAAGTCTTCTATATTTTTGATATCCTTGTTTATGGATAGTGTGGG 118433 |||||||||||| || || || ||||||| || | || |||||| | | | || Sbjct 9027 AAAATCTTCAAATTTGAAATCCTCTATATCCTTAACTTCACGTTTTATGAGCAATTTAGG 9086 Query 118434 AAACGGGAGAGGCTCCCTTGTGAGTTGGAGTTTCAGTGGCTCAATGTGATTCATATAGAC 118493 || || |||| | | | | ||||| |||| || ||||| |||||| |||| || Sbjct 9087 GAAAGGACGAGGTTTACGTTTTAGTTGTTCCTTCAAAGGTTCAATATGATTCTTATAAAC 9146 Query 118494 ATGAGCATCCCCAATTGTATGTATGAATTCACCAGGTGTAAGCCCTGTCAGGTGAGCAAT 118553 ||| | ||| ||| | ||||| || || || || ||| | | || || | |||||||| Sbjct 9147 ATGGGTATCACCAGTGGTATGAATAAAATCTCCTGGTTTCAAACCGGTAATATGAGCAAT 9206 Query 118554 CATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCCATGTCTGC 118613 ||| ||||| | ||| || |||| |||||| || || || ||||||||||| || Sbjct 9207 CATATATGTTAGTAAAGCATATGAAGCTATATTAAATGGCACTCCAAGACCCATGTCAGC 9266 Query 118614 TGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACTG 118664 | || ||||| || || || || || || || || ||||| || || Sbjct 9267 ACTGCGTTGATACAACTGACATGATAGTTCACCATTGGCCACATAGAATTG 9317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414011689030300