Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq82145 102 7e-17 >seq82145 Length=1636 Score = 102 bits (112), Expect = 7e-17 Identities = 173/247 (70%), Gaps = 4/247 (2%) Strand=Plus/Minus Query 39039 TAACTAAAATTTATTCAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTT 39098 |||| ||||||| || ||| || | || ||||| |||||||| | || ||||| Sbjct 1414 TAACGAAAATTTG--CATGCCACCACGCAAACGTAATACCAAATGCAATGTAGATTCTTT 1357 Query 39099 TTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAG 39158 ||||||||||||||| | | ||| || |||| || | |||||||| ||||| || | Sbjct 1356 TTGTATATTATAATCAGACAATGTGCGCCCGTCTTCCAATTGTTTGCCAGCAAAAATCAA 1297 Query 39159 ACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCA 39217 ||| || || || |||||| | | || ||||| ||||| ||| | | | | Sbjct 1296 ACGTTGTTGATCTGGTGGG-ATTCCTTCCTTGTCTTGAATTTTAGCTTTAACATTTTCAA 1238 Query 39218 CCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGA 39277 |||||| | ||| || |||| ||||| |||| || |||| || |||||||||| Sbjct 1237 TAGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTTTGCCAGTCAATGTCTTAACAAAGA 1178 Query 39278 TTTGCAT 39284 ||||||| Sbjct 1177 TTTGCAT 1171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429063579364475