Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq82145 152 3e-32 seq43370 131 1e-25 seq10127 131 1e-25 seq10922 123 2e-23 >seq82145 Length=1636 Score = 152 bits (168), Expect = 3e-32 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || ||||| || | || || ||||| |||||| | || ||||| | | Sbjct 1171 ATGCAAATCTTTGTTAAGACATTGACTGGCAAAACCATCACTTTGGAGGTTGAGCCTTCC 1230 Query 23671 GACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| |||||| | ||||| | |||| || ||||| ||||| | || |||||||| Sbjct 1231 GATACTATTGAAAATGTTAAAGCTAAAA-TTCAAGACAAGGAAGGAATCCCACCAGATCA 1289 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| ||||| || ||||| ||||||||| ||||||||| ||||| || ||||| || Sbjct 1290 ACAACGTTTGATTTTTGCTGGCAAACAATTGGAAGACGGGCGCACATTGTCTGATTATAA 1349 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||||||||||| || ||||| ||||| || ||| | ||||| || || Sbjct 1350 TATACAAAAAGAATCTACATTGCATTTGGTATTACGTTTGCGTGGTGG 1397 Score = 147 bits (162), Expect = 1e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||||||||| | ||||| ||||| || || | || ||||| | || Sbjct 1399 ATGCAAATTTTCGTTAAAACATTAACGGGTAAAACAATTACATTAGAGGTTGAACCTTCG 1458 Query 23671 GACACTGTTG-AAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| | | |||| ||||| | ||||| |||||||||||| | || |||||||| Sbjct 1459 GATACTATAGAAAATGTTAAAGC-TAAAATCCAAGACAAAGAAGGTATTCCCCCAGATCA 1517 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||||||| || || || || || || ||||||| | ||||||||| ||| ||||| Sbjct 1518 ACAGCGTTTGATTTTCGCTGGTAAGCAGTTGGAAGATGGCCGCACTTTATCCGACTACAA 1577 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| |||||||| ||||| | || || || || | ||||| || || Sbjct 1578 CATTCAAAAAGAATCCACCCTTCACTTGGTATTGCGTTTGCGTGGTGG 1625 >seq43370 Length=3724 Score = 131 bits (144), Expect = 1e-25 Identities = 161/219 (74%), Gaps = 1/219 (0%) Strand=Plus/Plus Query 23602 TTACTTAAA-ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGT 23660 || |||| | |||||||| ||||| ||||| | || || ||||| || || | ||||| Sbjct 2352 TTTCTTATAGATGCAGATCTTCGTCAAAACTTTAACTGGTAAAACCATTACCTTGGAAGT 2411 Query 23661 TGACTCCACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACC 23720 || | | ||||| |||||| | || ||||| |||||||||||| | || Sbjct 2412 CGAGCCTTCCGACACCATTGAAAATGTCAAGGCCAAAATCCAAGACAAAGAAGGTATCCC 2471 Query 23721 GCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGG 23780 ||||||||||| ||||| || || || || |||||| ||||||| | ||||| || Sbjct 2472 CCCAGATCAACAACGTTTGATCTTCGCTGGTAAACAATTGGAAGATGGTCGCACCTTGTC 2531 Query 23781 CGATTACAACATACAAAAAGAGTCCACATTACATTTAGT 23819 ||| |||||||| ||||| || ||||| |||||||| || Sbjct 2532 CGACTACAACATCCAAAAGGAATCCACTTTACATTTGGT 2570 >seq10127 Length=8452 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || ||| | || || ||||| ||||| | ||||| || | || Sbjct 7132 ATGCAAATCTTCGTAAAGACCTTGACCGGTAAAACCATCACCTTGGAAGTCGAGCCTTCG 7073 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| |||||| | || || || || || |||||| | || |||||||| Sbjct 7072 GACACTATTGAAAACGTCAAGGCTAAGATCCAGGATAAGGAAGGTATTCCTCCAGATCAG 7013 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||||| || ||||||||||||||| ||||||| | |||||||| || |||||| Sbjct 7012 CAACGTTTGATCTTTGCCGGCAAACAATTGGAAGATGGTCGCACTTTGTCTGACTACAAC 6953 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || ||||| |||||||| | ||||| || || | | || ||||| Sbjct 6952 ATCCAAAAGGAGTCCACCCTCCATTTGGTGCTACGTCTTCGTGGAGG 6906 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||||||||||||| | || || ||||| ||||| | |||||||| | | Sbjct 7360 ATGCAGATTTTCGTTAAAACCTTGACCGGCAAAACTATCACCTTGGAAGTTGAACCTTCC 7301 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||| | | || ||||| || || |||||| | || |||||||| Sbjct 7300 GATACCATTGAGAACGTGAAGGCTAAAATCCAGGATAAGGAAGGTATTCCCCCAGATCAG 7241 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||||| || || |||||||||||| ||||||| | |||||| | || |||||| Sbjct 7240 CAACGTTTGATCTTCGCCGGCAAACAATTGGAAGATGGACGCACCCTTTCTGACTACAAC 7181 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || || || ||||| | |||||||| || | ||||| || || Sbjct 7180 ATCCAGAAGGAATCCACCCTCCATTTAGTATTGCGTTTGCGTGGTGG 7134 >seq10922 Length=8781 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||||||||| || |||||||| ||||| || || || ||||| || || || | | Sbjct 3234 AATGCAGATTTTTGTCAAAACCCTAACGGGTAAGACCATTACTCTTGAGGTCGAGCCGTC 3175 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||||| |||||| | ||| || ||| ||||||||||| | || |||||||| Sbjct 3174 GGACACTATTGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCACCAGATCA 3115 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| ||||| || || || || |||||| ||||||| | || || | |||||||| Sbjct 3114 ACAACGTTTGATTTTCGCTGGAAAACAATTGGAAGATGGTCGTACCCTCTCGGATTACAA 3055 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTT 23822 || |||| || |||| | || ||||| || Sbjct 3054 TATTGAAAAGGAATCCATTCTGCACTTAGTATT 3022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337630297774100