Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq9860 641 5e-179 seq74052 273 3e-68 seq14616 116 5e-21 >seq9860 Length=13996 Score = 641 bits (710), Expect = 5e-179 Identities = 1420/2113 (67%), Gaps = 24/2113 (1%) Strand=Plus/Plus Query 76929 ATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATA 76988 |||||||| || | ||| || ||||||| ||| ||||||| | ||| ||||||| Sbjct 9144 ATGAAAGCGCCACGATCGGCGGCCATTTGTATGGTGGTCTTAACGGAAATCTCCCAAACT 9203 Query 76989 GTTTTGAAAACTTGTTTGATATCATCTGGAAGGT-TTGTATT--TTGAATGGAACCACCA 77045 || ||| | | | |||| | |||| | || ||| ||| ||||| || | | Sbjct 9204 GTCTTGTATAGATCACGTATATGTTTGGGAATTTCTTCTATGGCTTGTATGGAGCCGCGA 9263 Query 77046 TCTGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTA 77105 | || |||||| |||| || || ||||||| ||| || | || |||||| || || Sbjct 9264 TTGGAAATAATTTTATTTTTCATTTCATCATCCCATAAATCAAGTTCGGTTAAATCTTTA 9323 Query 77106 AGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTA 77165 || | |||| |||| || | | |||||||| ||||| || | | |||||||||||| Sbjct 9324 AGCAAATGATGATTGACAACATTGAATTCTCCCGACAAAACACGTCTAGTGTAAATATTG 9383 Query 77166 CTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGC 77225 ||| || ||||| | ||||||||||| || | |||||| || || ||||| || ||| Sbjct 9384 GAGGTGTACGGTTCAAAGGATTCATTGTTGCCTAGAATTTGTGCGGTCGAAGCTGTGGGC 9443 Query 77226 ATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATAT 77285 || || || | | ||| ||| | | ||||||| ||||||| || || | | | Sbjct 9444 ATGGGGGCTAATAGCAAAGAATTGCGTACACCATGTTGCTTGATTTTCTCCTTCAACTCT 9503 Query 77286 TTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTA 77345 ||| | ||| | |||| ||| || ||| | |||||||||||| || || ||| Sbjct 9504 GACCAGTTCCACAAGTCTGTGGGTGTTTTATTCCACATATCGTATTGTAGTATACCCTTA 9563 Query 77346 CTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTC 77405 || | | || ||| |||||||| | || ||| |||| || | ||||||||| Sbjct 9564 CTTACTGGACAGCCGGGATAAGTTTCATATGTGCCATCTTTTTCGGCCAATTCACAACTA 9623 Query 77406 GCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCA 77465 ||||||||||| || |||||||| ||||||||||||| | ||| | || | Sbjct 9624 GCTTCCAATGCGCCATAATAAATAGTTTCGAAAATCTGTTGATTTAACAAAAACGCCTTT 9683 Query 77466 ATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATA 77525 ||| ||| | || ||| | | | ||| || | ||| || || |||||||| || || Sbjct 9684 TCACTCTCATAGGGGTAACGCATTAAAATCAAAGTATCGGCAAAACCCTGAACACCTATG 9743 Query 77526 CCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATG 77585 |||||||| | ||| | | ||||||| | |||| || || | |||||||| |||||| Sbjct 9744 CCAATAGGACGATGACGCATATTGGATTTCCTAGCCTCAGGCAAGGGATAATAGTTAATG 9803 Query 77586 TCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAA 77645 || || ||||| |||||||| | || |||||| || | || | ||| |||| Sbjct 9804 TCGATGATTTTGTTGAGATTCTTGGTAATGACTTTAGTGACATTTTTCAATTTTTTAAAA 9863 Query 77646 TCAAA--TC-TTCCATCTATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACT 77702 ||||| || || | | | |||||||| || | ||||| || || | ||||||||| Sbjct 9864 TCAAAGGTCTTTTCTGGTGTGACAAACATATTAAGGGCTATGGAGGCCAAATTACAAACG 9923 Query 77703 GCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATA 77762 |||| ||||| || | | ||||| || ||||| || || | || || || || || Sbjct 9924 GCTATCTCATCAGGGGCAGAATATTCTACAATCTCTGTGCACAAGTTGCTGCACTTAATG 9983 Query 77763 GTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGA 77822 ||||| | |||||| ||||| || || ||||| | || ||||| | ||| | ||| Sbjct 9984 GTGCCAATATTTTGCTGGTTACTTTTGCGGTTGCAGGCATCTTTATACAACATATAGGGA 10043 Query 77823 GTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT-AGCTTTTATCAT 77881 || |||||||| | || | ||| || |||| ||| | || || ||| || | | Sbjct 10044 GTACCGGTTTCTACTTGGGCTTCAATTATAGCAAACCA-AAGAGCCTGAGCCTTGACAGT 10102 Query 77882 -AGATTTGTATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCC 77940 |||| | | ||| ||| ||||||| | ||||| | ||| ||||| || |||| Sbjct 10103 GCGATTGGCCTTACCT-TCTTTTTCATACTTGGTATACAATTCTTCGAATTCCTCACCCC 10161 Query 77941 AAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCT 78000 ||||||| | || || || |||| | || ||||| | ||||||||||||| ||| | Sbjct 10162 AAACATCCTGCAGACCGGGACATTTGTGAGGACACATTAGGGACCAGTCACCATTTTCTT 10221 Query 78001 TAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTAT 78060 || ||||||||||| | || |||||||| | |||| || ||||||| || ||| | Sbjct 10222 CCACACGTTTCATAAACAAGTCGGGTATCCACAAAGCATAGAAAAGATCTCTGGCTCTGT 10281 Query 78061 GTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATG 78120 | ||||| || || || || || || | ||| | ||| || | |||||| |||||||| | Sbjct 10282 GCTCTTCCTTGCCGGTGTTTTTCTTTAAATCCAAAAATTCAAAAATATCTGAATGCCAAG 10341 Query 78121 GTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGG 78180 | || | ||| || || | | ||||| ||||| ||| |||||||| | ||| | || Sbjct 10342 GCTCCAAATAAATAGCAAAGGCACCAGGGCGTTTGCCACCACCCTGATCAACATAACGGG 10401 Query 78181 CGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAG 78240 | || ||| | || || | |||||| | | ||| || || || || || || || Sbjct 10402 CCACATTGTTAAACACCCTAAGCATTGGTACCAGACCATTTGAGGTGCCGTTAGTGCCGT 10461 Query 78241 AAATATAACTTCCACTTGCGCGAAT--ATTACTAATGGATATCCCTATTCCTCCTGCCAT 78298 ||| || | || | || | ||| | | | || ||| || || || || || Sbjct 10462 CAATGGAAGTGCCCTTAGCTCTAATGCAGTGCACAT--TTATGCCAATACCACCCGCTGA 10519 Query 78299 CTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCAT 78358 || || || | || || ||| || || | | | |||||||| ||| || ||| Sbjct 10520 TTTGGAAATCATGGCACATTGTTCCACTGACTTGAAAATACCCTCAATAGAATCGGCCAC 10579 Query 78359 CAT-GTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATG 78417 ||| || || ||| || || |||| || | | || | || ||| |||| Sbjct 10580 CATGGTCAACAAG-AAGCATGACGACAACTGCGGTCTATTGGTAGCGGCCGCAAACAATG 10638 Query 78418 TCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATT 78477 | || || ||||| ||||| | ||||| | | ||| || ||||||||||| || | Sbjct 10639 TAGGTGAAGCATGAGTAAAATAACGCTCAGACAACAAATTATAAGTTTCAATAGCCGAAT 10698 Query 78478 CTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAA 78537 | || || | ||| || |||| ||||| | ||| ||||||||||| ||||| |||| Sbjct 10699 CAATATCATCTCCATGTATACCTATAGCTACTCTCATTAACATATGCTGTGGTCTCTCAA 10758 Query 78538 CCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGT 78597 | ||||| ||| ||||||| ||| || ||| | |||| || || || || || |||| Sbjct 10759 CAATCTTACCATTCATTTTCAGCAAATAAGATCTCTCCAGTGTCTTGAAGCCGAAGTAGT 10818 Query 78598 TGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAA 78657 |||| |||||| | || |||||||| ||||||| || || |||| Sbjct 10819 TGTAGCCAAAGTCACGATCATAAATAATTGACGAATTTAAACGTTC--TGCATTTTTCTG 10876 Query 78658 CAATATCCATGACAGTAGT----TGAAATAATAGGAGATCGTACACCATTTTTAGGATTA 78713 || || ||| ||| || ||||| | ||| ||| || || | | |||| Sbjct 10877 CACTA--CATTGTAGTGGTATTCGGAAATCAAAGGCGATGGTCTCCCCGTCTCTTTATTA 10934 Query 78714 ACATAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGA 78773 ||| | | | | | ||| || || || |||| |||||| ||||| ||||| | | Sbjct 10935 ACAAAATGATACAGATCACTTATAACCTCTGAGAATACTTTTTTCGTTTCTTTGTGCAAA 10994 Query 78774 TTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGTG 78833 || ||||| || || | || || | || |||||||| ||| | ||||| | || Sbjct 10995 TTGGATACTGCAATACGAGCTGCCAATATGGCATAATCGCCATGATTAGTAGTTAATGTA 11054 Query 78834 GCTGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATATAGTCCT 78893 || || | |||||||| ||| |||||| ||| || || || ||| || || || Sbjct 11055 GCAGCAGTCTCTGCCGCCAAATTATCTAGTTCTTGTGTAGTAACACCACAGTAAAGGCCA 11114 Query 78894 TGAATAACTTTCATGGCGATTTTGACAGGATCTACAAACTCAGTGTTCAATCCATAACAT 78953 | ||| || |||| | || || ||||| || || || | ||||| ||||| ||| Sbjct 11115 TTAATTACCTTCAGTGTAATGGCCACTGGATCAACGAAATCCATATTCAAGCCATAGCAT 11174 Query 78954 AATTTTCTAATACGAGATGTGATTTTATCAAATATAACATTCTCCTTGCATCCATTTCGT 79013 | ||| ||| || ||||| |||||||| || ||| | ||||||| ||||| |||| Sbjct 11175 AGCTTTTGAATTCGTGATGTTATTTTATCGAAATGAACCTCTTCCTTGCGTCCATCTCGT 11234 Query 79014 TTAATAACGAACA 79026 |||| ||| |||| Sbjct 11235 TTAAGAACAAACA 11247 Score = 86.0 bits (94), Expect = 9e-12 Identities = 125/174 (72%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 76773 TTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCA 76832 ||||| | ||||| ||||| | | | ||| || ||||| | | ||| ||||| || Sbjct 8923 TTATCTACGGTAAATTGAATAGCATTGGCTGCTGGCTTTGTTCTCAAATAATACATGCCG 8982 Query 76833 GTTTTTAGACCCAGACT-CCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGG 76891 || |||| | || || | ||| | |||||||| ||| |||| |||| ||| | || Sbjct 8983 GTCTTTA-AGCCTGATTTCCAGGCATAGAAATGTATGGAGGTCAATTTGCCGTAATTTGG 9041 Query 76892 ATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATC 76945 ||||| | ||| ||||| | ||| ||||||||||| |||||||| || | ||| Sbjct 9042 CTCGGCCACATGTATATTGAACGATTGACTTTGATCTATGAAAGCGCCACGATC 9095 >seq74052 Length=11856 Score = 273 bits (302), Expect = 3e-68 Identities = 489/707 (69%), Gaps = 19/707 (3%) Strand=Plus/Plus Query 47975 ATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTTAAC 48034 ||| || || |||||||| ||| | ||||| || ||||||||| ||||| | || || Sbjct 5452 ATCGGCCACAAATTCTATGTATTCTGACATCAATTTACAATTCATGCCTATCAAATTGAC 5511 Query 48035 TGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTAT--CGAT 48092 || | ||| || ||||| || |||||||| || | || || || || || | || Sbjct 5512 GGGCAAAGCATCTGTAAGGAATTCTTGTTCAATTTTCACCGCTTCGGTGATAATTTCAAT 5571 Query 48093 GTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGCAAAATCA 48152 | | | ||| ||| || | | | |||||||||||||||||| ||||||||| Sbjct 5572 AATTC--TCTCCCGACTGGGACGTTGTACCAAATGTTTAAACATTAATACCGCAAAATCA 5629 Query 48153 CAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGT 48212 ||||| | ||| ||||| | ||| ||||| || || ||||| ||||| ||||| || Sbjct 5630 CAATGTAAACCCTCATCACGTGAAATCAATTCATTGGAGAATGTAAGACCAGGCATAAGA 5689 Query 48213 CCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACG 48272 |||||||| || ||||| || || | || ||| ||| ||||| || || || || Sbjct 5690 CCACGTTTCTTTAGCCAGAAGATGGAGGCAAAACTGCCACTGAAGAAAATACCCTCCACA 5749 Query 48273 GCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGC----TTCGTTGTGTATCCA--CCGT 48326 || ||||| || ||| | || || || | || |||| | ||||| || | Sbjct 5750 GCAGCAAAAGCAATAATACGTTCACCAAAATTAGCCGATTTCGAGGAA-ATCCAAGCCAT 5808 Query 48327 TGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAG 48386 | ||||||||||||| ||| ||| ||||| ||||| || |||||||||||| | Sbjct 5809 AG--CCCAATCAGCCTTACGCTTAACAGCCGGCATAGTTTCAATGGCATTAAAGAGATAA 5866 Query 48387 tttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGA 48446 | | | || ||| |||| ||| |||| |||| || |||||||||||| ||||| Sbjct 5867 TCACGCTGCTCGCGATCCTTAATATAACTATCAATTAGAATACTATACATTTCAGAGTGT 5926 Query 48447 ATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCC 48506 | |||||| || || || || || || || ||||| | || ||||| | ||||| || Sbjct 5927 ACATTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGTGCCTCTGTAACTTGTACTTCT 5986 Query 48507 GTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCT 48566 | || |||||| | | ||| ||||| || || ||||| ||||||||| || ||| Sbjct 5987 TGGGAGAAGCGTTCAACAAGATTTTCATTGACAATGCCATCGGAAGCAGCAAAGAAAGCT 6046 Query 48567 AATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTC---ATTGATA 48623 | |||||| ||| |||| ||| ||| || ||| | | |||||| |||| Sbjct 6047 AGAACATGTGAAATGAAATGACGTTCATTGTCGGTGAGTCTTTCCCAGTCGGAATTG--- 6103 Query 48624 TCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGC 48670 ||||| || | ||| |||||||| | |||||||| || || || || Sbjct 6104 TCTTTGGAAAGATCCACTTCTTCTACAGTCCAAAAAGAAGCTTCGGC 6150 >seq14616 Length=5376 Score = 116 bits (128), Expect = 5e-21 Identities = 129/171 (75%), Gaps = 6/171 (4%) Strand=Plus/Plus Query 43234 CCAATATACTTCAAAAATTTGAGTGAGATCAACTGCCAAATTAGTATTATTGAAGATGGC 43293 ||||||| |||||||||||| | | ||| ||||| | | | ||| | |||| Sbjct 1280 CCAATATTCTTCAAAAATTTTGCTTAAATCTCGCGCCAATGTGGGACAATTCA---TGGC 1336 Query 43294 ---AATTCCCAATTCCTTGACCTGTGTTAGAGATCGCCAATCCATGTTAGCACTTCCTAA 43350 ||| |||||||| || |||||||||| ||||| ||| ||||| || ||||| || || Sbjct 1337 TAAAATACCCAATTCTTTAACCTGTGTTAAAGATCTCCAGTCCATATTGGCACTGCCCAA 1396 Query 43351 ATAAATATGTCTATTATCTGATATCCAAAATTTAGTATGAAGAACTCCACC 43401 |||||| ||| | ||||| || ||||||||||| ||||| | ||| ||||| Sbjct 1397 ATAAATGTGTTTGTTATCGGAAATCCAAAATTTTGTATGTAAAACACCACC 1447 Score = 89.7 bits (98), Expect = 7e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 42683 GTATCGGTAAAGTAATTTCCTGTCCAATTTGATGTGCCTATATACGCCGTTTTATCGGTT 42742 |||| |||||| |||| || | |||||| ||||| || ||||| || || ||||||||| Sbjct 711 GTATTGGTAAAATAATCACCCGACCAATTGGATGTACCAATATAGGCTGTATTATCGGTT 770 Query 42743 ACCATATATTTTGCGTGATTTACTCGGGAATACGGAATT 42781 ||||||||||| |||||| || ||| ||| |||||| Sbjct 771 ACCATATATTTATTGTGATTGACACGGCCATAAGGAATT 809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 693869279628000